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sw_12_scaffold_3756_4

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: 1770..2723

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1227456 species="Archaea similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 312.0
  • Bit_score: 511
  • Evalue 7.60e-142
endA; tRNA splicing endonuclease (EC:3.1.27.9) similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 303.0
  • Bit_score: 356
  • Evalue 8.20e-96
tRNA-splicing endonuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 312.0
  • Bit_score: 511
  • Evalue 5.40e-142

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 954
ATGAACGGGACCCTTCGTGATAGCGTCGTTCGCGTCGGGGGCGACGCCCGCCAGCGCTTTTACGATTCCAGCGGATACGGCCGGCCCACGGGCGAGGGGGTCGCGCTCGCGCCGGTCGAGGCCGCACATCTGCTCTTTCGCAACGATCTCGATGCGGTCGACGGGATGGGACTTCGGGAGTTCCTCGGCGTCGAAGACTGCGTCGTCCGATTCCTGGTCTACAAGGACTTCCGCGAGCGTGGGTTCTACCTTTCGCCCGCACGCGAGGGCTGGGTCGACGCTGCCGGCAGTCACGATATCGATGATCCCGCCGGCCCTGATCTGATCGTCTACCCGCAAGGCAAGGGACCGTGGGACGACGAGATCGCCTACCGGGTCCGGATCGTCGGCGAGCGCGACCCGATCCAGGCGTCGAGCCTCGGACAGTGCGTCCTCGCCGTCGTCGACGAGGAGAGCGAGATCACCTACCTCGACACCTCCCGTCCCGCTATCGACGGATCGACGACGTACGACGCACCGACCGACGTTGGGGGCGACCTCCTTGCGGATCGAGCAGTCCTCTGGAACCCGCCCGACGACCTCCACGAGGCGGCCTTTTACGGTCAGCGCCTCGCCGGCCGCGGGGCCGAAGGCGGTCCGCTCCAGCTCTCGCTCGTCGAGGCCGCCTTCCTCCTCGACGAAGGCACGATCGATCTCGGTGTCGACCTCGCCGCGGTCGTCGAACGCGGTCGACGGGTCGAGGGCGAGCGGTTCGACCGCCGGCTCGCGGTGTACACGGCGCTCCGCGAGGGGGGTCTCGTCCCGAAGACCGGCTTCAAGTTCGGCGCGGACTTTCGGACCTACGCCGACGTCGAGAGCGTCGACGATCTCGGTCACTCCGAACGGCTCGTCCGCGCGCTGACGACCCCGACCGGCGAGATCGCCTGGCTCGCTGTCGATCGACTCACGCCCTGA
PROTEIN sequence
Length: 318
MNGTLRDSVVRVGGDARQRFYDSSGYGRPTGEGVALAPVEAAHLLFRNDLDAVDGMGLREFLGVEDCVVRFLVYKDFRERGFYLSPAREGWVDAAGSHDIDDPAGPDLIVYPQGKGPWDDEIAYRVRIVGERDPIQASSLGQCVLAVVDEESEITYLDTSRPAIDGSTTYDAPTDVGGDLLADRAVLWNPPDDLHEAAFYGQRLAGRGAEGGPLQLSLVEAAFLLDEGTIDLGVDLAAVVERGRRVEGERFDRRLAVYTALREGGLVPKTGFKFGADFRTYADVESVDDLGHSERLVRALTTPTGEIAWLAVDRLTP*