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sw_12_scaffold_543_1

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: 61..1530

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 489.0
  • Bit_score: 929
  • Evalue 2.30e-267
tRNA-splicing ligase RtcB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 489.0
  • Bit_score: 929
  • Evalue 1.70e-267
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 490.0
  • Bit_score: 816
  • Evalue 5.80e-234

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1470
ATGGACACCTACGACGCCGACGGGATCACGCTCGAACGCGTAGCGGAGAACGTCTGGGAAATCCCACAGGAAGGCGGGATGAACGCGCCCGCACGGGTGCTCGCCAGCGAGGCGCTGCTCGACGAGATCGCCGACGACATGACGCTCGAACAGCTCAAGAACTCGACGCACCTTCCCGGTGTGACGAAGCACGCGATCTGCATGCCCGACGGCCACCAGGGCTACGGCTTCCCGGTCGGCGGGGTCGCGGGCATCGACGCCGAGAACGGCTGTATATCGCCCGGAGCTGTCGGATTCGACATAAATTGTGGCGTCCGGATGATGAAAACAAACCTCACCTACGGCGGCGTCGAGGGCCACGAGGAGGAGCTGGTCGAGTCCCTCTTTGCGAACATCCCGTCGGGACTCGGCGGCGGTGGCGTGGTCGAATCGGGCATCGACACCGTCGAAGCCGTCCTCGAACGGGGGATGAACTGGGCGCTGGAGGAGGGCTACGCCGTCGCCGAGGACCTCGCCCACTGCGAGGACGAGGGCCGCCGGCCGGACGCCGATCCAGGCGTTGTCTCACAGAAGGCGAAGGACCGCGGGAAGAACCAGATCGGGAGCCTCGGCTCGGGCAACCACTTCCTCGAAGTCCAGCGCGTGACCGACGTCTTCCGGGCGGACGTGGCGGATGCGTACGGTCTCGCCGAGGAGCAGATCGTGGTGTTGATCCACTGCGGGAGCCGAGGGCTAGGCCACCAAGTCTGCACCGAGTACACCCGCGAGGTCGAGCAGGCTCATTCGGGACTGCTCGATCGACTCCCGGACAAGGAGCTCGCGGCCGCGCCCGCCGGGAGCCAACTCGCCGAGGAGTACTACGGCGCGATGTGTGCGGCGATCAACTACGCGTGGGTCAACCGCCAGCTCATCATGCACCGCACTCGTCAGGTGTTCGAGCGCGTCTTCGATCGGTCGTGGGAGGCAATGGAGATGGACCTGCTGTACGACGTCGCGCACAACATCGCGAAGAAGGAAGTCCACGACGTCGGGGGCGAGGACGGCGAGGAAGAACGCGAACTCTACGTCCATCGGAAGGGCGCGACGCGGGCGTTCCCCGCCGGCCGAGAGGAGGTTCCGAGTGCGTACCGCGACGTAGGCCAGCCCGTCATCATTCCGGGAAGCATGGGCGCAGGGAGCTACGTGCTTCGTGGCGGCGAGGCCTCGCTCGAAACCACGTTCGGCTCGACCGCCCACGGCGCGGGCCGGACGATGAGTCGGACCCAGGCCAAGAACGAGTTCTGGGGTGAGGACGTCCAGGACGACCTGCAGGAGCAGAAGGTGTACGTGAAGGCCCAGAGCGGCGCGACAGTGGCCGAGGAGGCGCCAGGCGTCTACAAGAACGTCGACGAGGTGGTGCGGGTCTCCGAGGAACTCGGGATCGGCGATACGGTCGCGCGGACGTTCCCGGTCTGCAACATCAAGGGGTGA
PROTEIN sequence
Length: 490
MDTYDADGITLERVAENVWEIPQEGGMNAPARVLASEALLDEIADDMTLEQLKNSTHLPGVTKHAICMPDGHQGYGFPVGGVAGIDAENGCISPGAVGFDINCGVRMMKTNLTYGGVEGHEEELVESLFANIPSGLGGGGVVESGIDTVEAVLERGMNWALEEGYAVAEDLAHCEDEGRRPDADPGVVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFRADVADAYGLAEEQIVVLIHCGSRGLGHQVCTEYTREVEQAHSGLLDRLPDKELAAAPAGSQLAEEYYGAMCAAINYAWVNRQLIMHRTRQVFERVFDRSWEAMEMDLLYDVAHNIAKKEVHDVGGEDGEEERELYVHRKGATRAFPAGREEVPSAYRDVGQPVIIPGSMGAGSYVLRGGEASLETTFGSTAHGAGRTMSRTQAKNEFWGEDVQDDLQEQKVYVKAQSGATVAEEAPGVYKNVDEVVRVSEELGIGDTVARTFPVCNIKG*