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sw_12_scaffold_7377_5

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(2625..3050)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 141.0
  • Bit_score: 267
  • Evalue 6.10e-69
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 141.0
  • Bit_score: 267
  • Evalue 8.50e-69
nusA; putative transcription elongation factor NusA protein similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 141.0
  • Bit_score: 189
  • Evalue 7.70e-46

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 426
ATGCGCGTGACGCTCTCGGACGCGGCGCGCCGACACATCGCGCTGTTCGAGGACGTCACGGGGACGACCGCCGTCGATTGTCTGTTCGACGAGGCGAACGATCGGGTGTGTTTCCTCGTGGCGGCCGGCGAGATGGCCGACGCGATCGGCCCCGATGGCCAAACGGTCGAAAAAGTCGAACAGCGCCTCGATCGCCAGGTCACCCTCGTCGAGGACGCCGACACGCCCGAGGCGTTCGTCGCCAACGCGCTCGCGCCCGCCGCGGTTTATAATGTCACGATCAGCGAGAACCAGGATACTGTGGCTTATGCCGAGGTCGACCGGGCCGATCGGGGCGCAGCGATCGGGGCTGATGGCCGGCGGATCGAGACCGCGCGTCGCCTCGCGAAGCGCCACTTCGACATCGACGACATCGAACTAGCATAA
PROTEIN sequence
Length: 142
MRVTLSDAARRHIALFEDVTGTTAVDCLFDEANDRVCFLVAAGEMADAIGPDGQTVEKVEQRLDRQVTLVEDADTPEAFVANALAPAAVYNVTISENQDTVAYAEVDRADRGAAIGADGRRIETARRLAKRHFDIDDIELA*