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sw_12_scaffold_7377_9

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(7215..7961)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 242.0
  • Bit_score: 445
  • Evalue 6.80e-122
DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG30_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 242.0
  • Bit_score: 445
  • Evalue 4.80e-122
DNA-directed RNA polymerase subunit A' similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 242.0
  • Bit_score: 388
  • Evalue 1.20e-105

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 747
CTCGACAACGATGTTAATGACGTGACGAAGGCGGCGATCCGCCAGGCCAGAAAGAAGGATCGGTGTACGTACTGCGGCGAGGAGCAGTACGACATCCAACACGAGAAGCCGACGACGTACTACGAGGTCCAAGACGTGCTCGCGGCGGAGTACGCCGAGCTGATCGCCGAAGCGATGCAGCCCGACGAGGAATCGGGCGATCCCGGGAGCTCGCCCCAGCAGCTCGCCGAGGAGACCGACATCGATCTCTCGCGGATCAACGACATTCTGGGTGGGGAGTTCCGCCCGCGCGAGGCCGACCGCGAGGCGATCGAGCGCGCGCTCGACGTCGACCTCACCGAGGAGGACATGAACAAGCTGATGCCGAGCGATGTCCGGGACTGGTTCGAGGCGATCCCGGACGAGGACGTCGAAGTGCTCGGGATCGACCCCGAGCGCTCGCGGCCGGAGTGGATGGTCCTCACCGTGCTTCCGGTGCCGCCCGTCACCGCCCGGCCGTCGATCACCCTCGACAACGGCCAGCGAAGCGAGGACGACCTGACCCACAAACTCGTGGACATCATCCGGATCAACCAGCGGTTCATGGAGAACCGCGAGGCCGGCGCGCCCCAGCTCATCATCGAGGACCTCTGGGAGCTGCTCCAGTACCACGTCACGACGTTCATGGACAACGAGATGTTATCTCGCCGGACCCGACCCTCAGCCTCAACGAGGTCGGCGTTCCCGAACGGGTCGCGGAGGAGATGA
PROTEIN sequence
Length: 249
LDNDVNDVTKAAIRQARKKDRCTYCGEEQYDIQHEKPTTYYEVQDVLAAEYAELIAEAMQPDEESGDPGSSPQQLAEETDIDLSRINDILGGEFRPREADREAIERALDVDLTEEDMNKLMPSDVRDWFEAIPDEDVEVLGIDPERSRPEWMVLTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEMLSRRTRPSASTRSAFPNGSRRR*