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sw_12_scaffold_2391_6

Organism: SW_12_Halobacteria_71_31

near complete RP 29 / 55 MC: 5 BSCG 22 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: comp(5355..6017)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase b (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 2.60e-56
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 1.30e-55
Probable tRNA pseudouridine synthase B n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPG3_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 9.10e-56

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 663
ATGACCGACCGCCGTGAAGGCGCCGACGCGGACGGCCCGCTCCGACCGCCGCCGGAGGAGCGTTCGCCGGCGGAACTGCTCGCCTTCGGCGTCGTCAACCTCGACAAGCCGCCCGGGCCGTCCGCACACCAGGTGTCCGCCTGGGTGCGCGACCTGGCCGGCGTCGAGCGCGCCGCCCACGCCGGCACGCTCGACCCCTCGGTGACCGGCTGTCTGCCCGTGCTCACCGGCGACGCCACGCGGGTCGCCCGGGCGCTGCTCGGGCCGAAGGAGTACGTCGCCGTTCTCGAACTCCACCGGCGGGCGCCCGAGGACCTCGACGCCGTCATCGAGGCGTTCGAGGGGCCGATCCTCCAGCGCCCGCCACGAAAGAGCGCCGTCGACCGCTCGCCGCGTGTCCGGCGGGTGTACGACATGACCGCCGTCGAGTCCGAGCCGCGCCGACTGCTGCTGCGGGTCGACTGCGAGAGCGGCACCTACGTCCGCAAGCTCTGTCACCTGGAGGCCGACGACGACGCCGACCCCGACAACGAAGAGCCGCTGGTCGCCTGCTACACGCCGGACGGCGCGGCCGTCTGTCTCGGGCGGCTGGTCGGCCACCCTGACGCCGACGAGGGCACCGTCGTCGACCTGGAGCGGGGGCTCGTCCGATCCTGCGGTTGA
PROTEIN sequence
Length: 221
MTDRREGADADGPLRPPPEERSPAELLAFGVVNLDKPPGPSAHQVSAWVRDLAGVERAAHAGTLDPSVTGCLPVLTGDATRVARALLGPKEYVAVLELHRRAPEDLDAVIEAFEGPILQRPPRKSAVDRSPRVRRVYDMTAVESEPRRLLLRVDCESGTYVRKLCHLEADDDADPDNEEPLVACYTPDGAAVCLGRLVGHPDADEGTVVDLERGLVRSCG*