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sw_12_scaffold_309_5

Organism: SW_12_Salinibacter_ruber_64_31

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 1614..4724

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Salisaeta longa RepID=UPI0003B77068 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 999.99
  • Bit_score: 1190
  • Evalue 0.0
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH51658.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 999.99
  • Bit_score: 973
  • Evalue 3.00e-280
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 999.99
  • Bit_score: 947
  • Evalue 3.50e-273

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3111
ATGAGAAAACTAACAAAAGCGCTCGCCTGCAGTGGACTGCTGCTGTTCCTGCTCGCCCCCGGGCTCAGCCAGGCCCAGGAAATTACCGTTACCGGAACGGTGATGGATGCGAGCACGAACACGCCCTTGCCGGGCGCCACCGTGAGCTTGCAGGGCACCACCCGCGGTACCGCTACGAGCTCGAACGGAAATTATGAGTTGGAGGCGCCCTCCAACGGCACCCTCGTGTTCTCATTTGTCGGATATGCCACGCAAGAGATAAACATCGACGGGCGCTCCACCATCGACGTGGCCTTGGCGCCTGCAGAGCAGCAGCTCGACGAGGTGGTCGTCGTGGGGTTTGGACAACGAGAAGAACAATCCGTGACGGGGAGCATCTCGCAGGTCTCCTCCGGGGAAATTGAGGCCGCCGAGGTTAGCAGCTTCGAGGAGGTCCTTCAGGGCCGCACCCCCGGCGTCCATATCACAAACTCCAGCGGAAAGTTGGGACAGGGCATCCGGGTCCGCATCCGCGGGAATTCGTCCGTCACGGGCGACAACCAACCGCTCTTCGTTGTGGACGGCGTTCCTCTCAACGACCAGAGCCTGTCTGACAACGGCGCGCCCACGAACCCGCTGTCCCAACTCAACGTCAACGACATCGAGTCGATCGAGGTGCTGAAGGACGCCTCCGCCACAGCCATCTACGGGGCTCGGGCCTCGAATGGCGTTGTTCTCATTTCGACCAAGCAGGGAACGGAAGGCGGCTCGCAATTTTCGTTCAGTCTGAAGCGCGGCTGGCGAGGCCCGACCAACAAGGTCGACATGATGAATGCGAGCCAGTATGTCGACTACTACCTGGAAGCGGCCAAAAACAGCCCCTTTCCTTGGGCGGAATCCTTTATACGTAGCTCCTTCAATGGACTCGCCGCCGGGACCGACTGGACGCAGGCCATCGGGGAAAATACCAATCCGGTCGTCGACACCGACTGGACCGACAAGCCGTTTGCGAGCAACCCCACCAGCTTCGAGGCCAGTCTGAGCGCCCGGGGCGGCGACGAGACGACCACGTTCTACATCTCGGGCCTCTACAGCCAGACCGACGGCATCCTATTCAAGAACTCCTACGACAAGATCTCCGGCCGGGCGAACGTGACCCACTCGTTCTCCGACCAGTTCGAGGTGGGCACGCGCCTGAACCTGAACCGCGTGATCAACCAGCGTGTCCCGAACGACAATGCGTTTGCGACCCCGGTCCAGTTGATTGCCCAAACTCCCATCTCCCCGGTGTTCGAGCCCCAAACGGAAGGCATCCCAACCAACGATCAGGGCCTTCTCACACAGTACCAGCCGACGGACGACTACTTTAACCAGACCCTATATTTCAACAACCTGCTCTACAAAGACAACGTCCGGCACAACGTGACGACCTTCCGGACCCTCGGCAATGCCTTTGCGGAGTACGACCTGTTGAGCAGCCTCTCTCTTCGGGGCGAATTCGGTCTGGACCTCCGCACGCGAAACGCCGACCGGTACTGGAACAGCAAGGTCTTTCAGACGGTCGGGACCGACGAGGGCATTGGCCGGCAGGTGTGGGACCGAATCGTCAACTATAACGTCGATGCATTCCTCAACTATGATAACACGTTCGGGAACGTCCACAGCCTCTCCGGTACTGCTGGAATGCAGCTGCAGTCGTCCACAACGAATAGCGCCGCGGTGGAAGTGGAGAGCTTTCCGAATGACAGCTTCCAGCAGATCGACAGTGGATCGGACATCGTGGACGCGGATGGCTCGGAAACCACGTACCAGTTCCTGGCCTACTTCGGCCGTCTCAACTACAACTACGACGGACGCTACTTCCTGAAGCTCAGCGGGCGGTATGAGGGCTCTTCTCGCTTTGGACAAGAAAACCGATACGGCTTCTTCCCGGCCGCGTCCGCCGGGTGGGTCCTTACGGAAGAGTCCTTTTTCCCATCGACCGATCTGGTGAACCGCCTGAAGCTGCGCACCAGCTTCGGCGTCACCGGCAACGCAGGCATCGGCAACTTTCCCTCTCTCGGCCTCTGGGGCGCGTCCACCTACGCGGGACAGTCCGGCATCGACCCCAGCCAGACCCCGAACCCGGCCCTGCAGTGGGAGCAGACTCAGGAGGTCACCCTGGGCCTCGACTACGAACTGTTTAACAGTCGGATCACCGGCAGCATCGATGTCTACCGCAAGACCACAAACGACCTACTGCTGGATCTCAATGTGCCGGCCACCACAGGCTTCTTAAGCCAAACGCGCAATGTGGGAGAGGTGAAGAACCGGGGACTCGAATTTCTAATTGAGACCCGGAACCTCACCGGCAACTTTCGCTGGTCCTCCAACTTCAACGTCTCGTTCAACCGAAACGAGGTGACCGACCTGAACGGTCAGGTGCTCACGGGAGGATTCGTCAATCAGGCGCGCAAGGGCGAGCCACTCGGCGTCTTCTACGCGCTCGAATATGCCGGCGTGGATCCCCAGAACGGAGACGCGCTCTACTACGTCAATGAGAAAAATGAGGACGGCGAAATCGTCAATTCGGGGGCGACGACCAATGACCCGAATGCGGCCAACCGTGTCGTCATTGGGAGCCCGCAGCCCGACTTTACGGGTGGATTCGGCAATACACTGTCGTACAAAGGGGTGCAACTGCGCTTCCTGTTCACATTCGACCAGGGCAGTCAGATTTTTGACGGCGGCGGCGAGTACAAAACCGCCAACGGCCGGTTCCGCGACAACCAACACGTGAGCCAGTTGGACGCCTGGGAAGAGCCCGGGGATCAGACGGACGTGCCGGAGCCCCGCCTCTTCGAGAACAACGGAGCGGCGGACTCCGACCGGTACCTCTACGACGCGTCGTACATCCGGCTCAAGAACGTCAACCTATCCTACAACTTGCCGACGCGACTGATGCAGAGCTTGTCGGTCATCAGTGCCCGAATCTTTGTGACGGGTCAAAACCTCCTCACGTTTACCGACTACCGGTGGTGGGATCCGGAGGCGAACGCTGATGCCTTCTCCGGCAATCTCGGCTTCGGAAACGAGTTCTACACTGCCCCTCAGACCCGGTCAGTCACCGGCGGCATCCAGCTCTCATTCTAA
PROTEIN sequence
Length: 1037
MRKLTKALACSGLLLFLLAPGLSQAQEITVTGTVMDASTNTPLPGATVSLQGTTRGTATSSNGNYELEAPSNGTLVFSFVGYATQEINIDGRSTIDVALAPAEQQLDEVVVVGFGQREEQSVTGSISQVSSGEIEAAEVSSFEEVLQGRTPGVHITNSSGKLGQGIRVRIRGNSSVTGDNQPLFVVDGVPLNDQSLSDNGAPTNPLSQLNVNDIESIEVLKDASATAIYGARASNGVVLISTKQGTEGGSQFSFSLKRGWRGPTNKVDMMNASQYVDYYLEAAKNSPFPWAESFIRSSFNGLAAGTDWTQAIGENTNPVVDTDWTDKPFASNPTSFEASLSARGGDETTTFYISGLYSQTDGILFKNSYDKISGRANVTHSFSDQFEVGTRLNLNRVINQRVPNDNAFATPVQLIAQTPISPVFEPQTEGIPTNDQGLLTQYQPTDDYFNQTLYFNNLLYKDNVRHNVTTFRTLGNAFAEYDLLSSLSLRGEFGLDLRTRNADRYWNSKVFQTVGTDEGIGRQVWDRIVNYNVDAFLNYDNTFGNVHSLSGTAGMQLQSSTTNSAAVEVESFPNDSFQQIDSGSDIVDADGSETTYQFLAYFGRLNYNYDGRYFLKLSGRYEGSSRFGQENRYGFFPAASAGWVLTEESFFPSTDLVNRLKLRTSFGVTGNAGIGNFPSLGLWGASTYAGQSGIDPSQTPNPALQWEQTQEVTLGLDYELFNSRITGSIDVYRKTTNDLLLDLNVPATTGFLSQTRNVGEVKNRGLEFLIETRNLTGNFRWSSNFNVSFNRNEVTDLNGQVLTGGFVNQARKGEPLGVFYALEYAGVDPQNGDALYYVNEKNEDGEIVNSGATTNDPNAANRVVIGSPQPDFTGGFGNTLSYKGVQLRFLFTFDQGSQIFDGGGEYKTANGRFRDNQHVSQLDAWEEPGDQTDVPEPRLFENNGAADSDRYLYDASYIRLKNVNLSYNLPTRLMQSLSVISARIFVTGQNLLTFTDYRWWDPEANADAFSGNLGFGNEFYTAPQTRSVTGGIQLSF*