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sw_12_scaffold_3_24

Organism: SW_12_Oscillatoriophycideae_48_29

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: 21964..22272

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037B9957 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 102.0
  • Bit_score: 162
  • Evalue 2.00e-37
Uncharacterized protein {ECO:0000313|EMBL:KGF72686.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 102.0
  • Bit_score: 164
  • Evalue 9.50e-38
RRM domain-containing RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 97.0
  • Bit_score: 157
  • Evalue 2.30e-36

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Taxonomy

Neosynechococcus sphagnicola → Neosynechococcus → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGTCCATCTATATAGGTAATTTATCTTATGAAGTCACTCAGGACGACCTGACGGATGTCTTCACAGAATATGGAACCGTTAAGCGGGTTTATCTGCCAACCGACCGGGAAACTGGTCGGATGCGGGGCTTTGGTTTCGTGGAAATGGAAAGCGAAGCAGAAGAGGCATCGGCAATTGAAACGCTTGATGGTGCTGAGTGGATGGGTCGTGACTTGAAAGTCAATAAAGCTCGACCTCGTGAGGATAAAAAGCGGTCTGGCGGTAACTTTAGCGGCGGCGGCAGAGGGGGCGCTTCTCGAGGCTACTAA
PROTEIN sequence
Length: 103
MSIYIGNLSYEVTQDDLTDVFTEYGTVKRVYLPTDRETGRMRGFGFVEMESEAEEASAIETLDGAEWMGRDLKVNKARPREDKKRSGGNFSGGGRGGASRGY*