ggKbase home page

sw_12_scaffold_31_15

Organism: SW_12_Oscillatoriophycideae_48_29

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(16883..19231)

Top 3 Functional Annotations

Value Algorithm Source
PAS fold family (Modular protein) n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FUM3_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 591.0
  • Bit_score: 567
  • Evalue 2.00e-158
PAS fold family (Modular protein) {ECO:0000313|EMBL:CBN54063.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 650 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 591.0
  • Bit_score: 567
  • Evalue 2.90e-158
PAS/PAC sensors-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 740.0
  • Bit_score: 561
  • Evalue 3.20e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Oscillatoria] sp. PCC 6506 → Kamptonema → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 2349
ATGTTCAATGGGTCATGGATCGAATGGCTACCCTCTCTCCAGCCAGCAATTCTGGTCATAGGAGTCGGCGCAACCCTGCCCATCGCTTTGGTAATCCGCTCGATTTACACAGTTTTACATCGAGTCCAAATCGCTGAGGCAGCCCAAGCAACTCTAGAAAAAGAAATTGCCGAGCGCAAGCGGATAGAAGAAGCATTGCGTCTTTCGGAAGAAAAGTTTGCAAAAGCCTTCCGCTCCAGTCCCGATTCAATTACAATCAGCACCCTAACAGATGGACGCTTTATTGAAGTTAATGACAGTTGCCTCAAACTCCTTGGTTATTCCCGCGAGGAGATAATTGGTAAGACTTCACTGGAGCTAGGTATTTGGGCGAAAAGAGAAGACCGCGCTAAGATGAGGCAGCTCTTGGAAGAGAGGGGGGTAATTCTTAACTTAGAAGCGGAATTTCGCTCCAGCTCAGGTGAGGTACGTGTTGGACTGATAGCTGCTGACATAATCAACTTTAGCAGCGAACAGTGCATCCTTAGTGTGATCCGCGACATCACCGAACGCAAGCAAGCACAAGAAGCTTTCCATCGCGCCCGGGTAGCCGAAACAGCCCAAGAAATCCTCGAAAAAGAAATCGCTGAGCGCAAGCGGATAGAAGAAGCATTGCGTCTTTCGGAAGAAAAGTTTGCAAAAGCCTTCCGCTCCAGCCCTGACTCAATTACAATCAGCACCCTAATAGATGGACGCTTTATTGAAGTTAATGACAGTTGCCTCAAACTCCTTGGTTATTCTCGCGAGGAAATGATTGGTCGGACTGCACAGGAGCTGAATATTTGGGCAAATATAGAAAACCGCACCAAGATGCAAGAGATCTTCCAAGAGAAGGGGTCAATTCTTAATTTTGAGGCAGAATTTTGCAAAAAGTCTGGTGAGTCCCTTGTGGGACTATTGTCAGCCGAAATTATTGACTTTAGCGGCGAACTTTGTATTCTTGCTGTCATTCGCGACATAACTGAGCGCAAGCGAATTGAGGAGCGTCTGCGATACAATGCCTTTCACGATACGCTAACGGGCTTACCCAATCGGTCTTTATTCCTAGATCGCTTGGAGCATGCGATCGCCCGCTCCCAACGACGTTCCAATTACGAATTCGCTGTTCTTCTACTCGATCTAGACCGCTTCAAGCGTGTCAATGACAGTCTCGGACATTTGGCAGGCGATCACCTGCTGAAAGAAATCGCTTCCAGGCTGCAAGAATGCCTTCGCCCTGGCGATACCATTGCCCGATTCGGGGGTGATGAGTTCATGGTCTTGCTAGAGAAGATCGAAGAGAGCAAAGACGTGATCGAAATTGCCCAGCGAGTCCGGGCAGAATTGGCATGGCCGTTTGTTTTAGAGGGTCACGAAGTATTTACTACTGCCAGTATTGGCATCGTCCTGAGCAGTGCAGAAGGCGACATAGCAGAAGATTTTTTACGCAACGCCGACATTGCTCTATATCGCGCCAAGTCGCAGAGTGGAGCGCACTATCAGATCTTCGACGACGCTATGCATGCCCAAGCGGTGGCACACCTACAGTTAGAAATGGCACTGCGGCGAGCGATTGAACGTCAAGAGCTACGAATTTACTATCAACCGATTGTGTCACTAACCAGCGGCAAGATTACCGGATTTGAAGCGCTAGTACGTTGGCAGCATCCCCAGCGTGGTCTCGTTTCCCCAGCAGAGTTCATTCCCATTGCGGAAGAGACGGGACTGATTATCCCCATGAGTCAGTGGATACTTCAGACTGCCTGTCAGCAAACGCAGAAATGGCAGCAACAAATTTCCACAAATTCTCCTTTGTCAATTAGTGTGAATCTCTCTAGCAAGCAGTTTTCCCAGGCAGATTTAGTCGAACAAATTGAAACAGTGCTGCAACAAACTGGACTGGAAGCTTCTAGTTTGAAATTAGAAATTACCGAAACCGTCATTATAGAATACGCTGAATCCGTAGCAAACATGCTCTCGCAACTGAAGGCGCTCAATATTCAGTTAGAGTTGGATGATTTTGGCACAGGCCATTCATCTTTAACATATTTACACCAATTTCCCGTTAATGGCATCAAGATTGATCGCTCTTTTGTTAGTCATATCGGCACCGATGAGGGTTCCTCTGCAATTGTTAAAACTATTATGATGCTATCCCAAAATCTCCACTTGAATGCGATCGCCGAAGGGATTGAAACTCCCGATCAACTGGCTCAAATCAGGGAATTCGGATGCGAGTATGGGCAAGGATATTATTTCTCTAAACCCGTAGACACCCAAACTGCGGAAGAATTACTCAAAAATCAGGCAATTCTTGGTTCTGATTCCTAA
PROTEIN sequence
Length: 783
MFNGSWIEWLPSLQPAILVIGVGATLPIALVIRSIYTVLHRVQIAEAAQATLEKEIAERKRIEEALRLSEEKFAKAFRSSPDSITISTLTDGRFIEVNDSCLKLLGYSREEIIGKTSLELGIWAKREDRAKMRQLLEERGVILNLEAEFRSSSGEVRVGLIAADIINFSSEQCILSVIRDITERKQAQEAFHRARVAETAQEILEKEIAERKRIEEALRLSEEKFAKAFRSSPDSITISTLIDGRFIEVNDSCLKLLGYSREEMIGRTAQELNIWANIENRTKMQEIFQEKGSILNFEAEFCKKSGESLVGLLSAEIIDFSGELCILAVIRDITERKRIEERLRYNAFHDTLTGLPNRSLFLDRLEHAIARSQRRSNYEFAVLLLDLDRFKRVNDSLGHLAGDHLLKEIASRLQECLRPGDTIARFGGDEFMVLLEKIEESKDVIEIAQRVRAELAWPFVLEGHEVFTTASIGIVLSSAEGDIAEDFLRNADIALYRAKSQSGAHYQIFDDAMHAQAVAHLQLEMALRRAIERQELRIYYQPIVSLTSGKITGFEALVRWQHPQRGLVSPAEFIPIAEETGLIIPMSQWILQTACQQTQKWQQQISTNSPLSISVNLSSKQFSQADLVEQIETVLQQTGLEASSLKLEITETVIIEYAESVANMLSQLKALNIQLELDDFGTGHSSLTYLHQFPVNGIKIDRSFVSHIGTDEGSSAIVKTIMMLSQNLHLNAIAEGIETPDQLAQIREFGCEYGQGYYFSKPVDTQTAEELLKNQAILGSDS*