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sw_12_scaffold_3505_8

Organism: SW_12_Halobacteriales_69_24

partial RP 16 / 55 MC: 2 BSCG 13 / 51 MC: 2 ASCG 27 / 38 MC: 1
Location: 6827..7012

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Lsm n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INQ7_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 61.0
  • Bit_score: 107
  • Evalue 6.00e-21
snRNP-like protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 61.0
  • Bit_score: 107
  • Evalue 1.70e-21
RNA-binding protein Lsm {ECO:0000313|EMBL:CAI50245.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 61.0
  • Bit_score: 107
  • Evalue 8.30e-21

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 186
ATGACGGACCGGCCCCTCGACGTCCTCGAAGCGACCCTCGGATCGGAAGTCAGCGTCACGCTGAAGGGCGGTGAGAACTACGACGGCGTTCTCGCCGGCTACGACCAGCACATGAACCTCGTCCTGGAGGACGGCGACAACGTAACCATTATCCGCGGCGATAACGTCGTTTCGATACAACCATGA
PROTEIN sequence
Length: 62
MTDRPLDVLEATLGSEVSVTLKGGENYDGVLAGYDQHMNLVLEDGDNVTIIRGDNVVSIQP*