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sw_12_scaffold_6883_8

Organism: SW_12_Halobacteriales_69_24

partial RP 16 / 55 MC: 2 BSCG 13 / 51 MC: 2 ASCG 27 / 38 MC: 1
Location: comp(3653..4327)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=4 Tax=Haloarcula RepID=G0HXH5_HALHT similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 214.0
  • Bit_score: 238
  • Evalue 6.20e-60
tfbA_3; transcription initiation factor TFB 3 similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 214.0
  • Bit_score: 243
  • Evalue 7.10e-62
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 214.0
  • Bit_score: 238
  • Evalue 8.70e-60

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Taxonomy

Haloarcula hispanica → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 675
GTGGCCGACACCGAGCACGGCGAGACGGTCTGCCGCGACTGCGGCCTCGTGGTCGAGGCCGACGAGATCGACCGCGGCCCGGAGTGGCGCGCCTTCGACAGCGCCGAGAAGGACGAAAAATCCCGCGTCGGCGCCCCGACGACCAACATGATGCACGACAAGGGCCTGTCGACGAACATCGACTGGCGCGACCAGGACGCCTACGGCAACTCGCTTGACGCCCGCCAGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCCGGCAGGCCGGCGTCCCGCGGAGCCTCGACGAGGTCTCGGGCGTCTCCCGCGTCGAGAAGAGCGAGATCGCCCGGACCTACCGGTACGTGGTCCGGGAGCTGAACCTCGAGGTCAGACCCGCCGATCCCGAAAGCTACGTGCCGCGGTTCGCGAGTGACCTCGCGCTGTCCGACGAGGCCGAGAACCGCGCCCGCACACTCCTCCGGAACGCCAAGGACGAGGGCGTTCACTCGGGCAAGTCCCCGGTCGGGCTGGCCGCCGCGGCCGTCTACGCCGCCTCGCTTCTCACCAACGAAAAGACCACACAGGCCGCGGTCAGCGAGGTCGCCGACATCTCGGAGGTCACCATCCGGAACCGGTACCACGAACTGCTCGAGGCCGAACAGGAGTTCGCGGTCGCCTGA
PROTEIN sequence
Length: 225
VADTEHGETVCRDCGLVVEADEIDRGPEWRAFDSAEKDEKSRVGAPTTNMMHDKGLSTNIDWRDQDAYGNSLDARQRXXXXXXXXXXXXARQAGVPRSLDEVSGVSRVEKSEIARTYRYVVRELNLEVRPADPESYVPRFASDLALSDEAENRARTLLRNAKDEGVHSGKSPVGLAAAAVYAASLLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQEFAVA*