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sw_12_scaffold_513_5

Organism: SW_12_Halobacteriales_69_24

partial RP 16 / 55 MC: 2 BSCG 13 / 51 MC: 2 ASCG 27 / 38 MC: 1
Location: comp(2385..3350)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH4_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 325.0
  • Bit_score: 573
  • Evalue 1.20e-160
tfbA_8; transcription initiation factor TFB 8 similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 325.0
  • Bit_score: 573
  • Evalue 3.30e-161
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 325.0
  • Bit_score: 573
  • Evalue 1.60e-160

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 966
ATGACACGGCCCACCCGTCAACGGGAGCGAACGCGCCAGGAGGCCGCCGAGGACGTCGATGGGGACGAAACCGCCGTCTGTCCGGAATGTAACTCGGAGGAGATCCTCAAGGACGCCGACCGTGGCGAACTCGTCTGTGACGGCTGTGGGCTCGTCGTCGAGGAGGACCACATCGACCCCGGCCCGGAGTGGCGGGCGTTCAACCACTCCGAACGCCAGGAGAAGTCCCGGGTCGGCGCGCCGACCACCAGGACGATGCACGACAAGGGCCTCACGACGACCATCGACTGGAAGGACAAGGACGCCTACGGCCGTTCCATATCCTCGAAGAAGCGCTCCCAGATGCACCGGCTCCGCAAGTGGCAAGAGCGGATCCGCACGAAGGACGCCGGGGAGCGCAACCTCCAGTTCGCCCTGTCGGAGATCGACCGGATGGCGTCGGCACAGGGCGTGCCGCGCTCCGTCCGGGAGGTCGCCTCCGTCATCTACCGGCGCGCACTGGACGACGACCTCATCCGCGGCCGATCCATCGAGGGCGTCGCCACCGCGGCGCTGTACGCCGCCTGCCGCAAGGAGGGCATCCCGCGCTCGCTGGAGGAGATCAGCGAGGTCTCCCGCGTCGAACGGAAGGAGATCGGCCGCACCTACCGCTACATCTCCCAGGAACTCGGCCTCGAGATGGAGCCCGTCGACCCGACGAAGTACGTCCCCCGCTTTTGCTCGGAACTCGAACTCCCGGAGGAAGTACAGACGAAAGCCAGCGAGATCATCGAAACCACCTCCGAGAAGGGACTCCTCTCGGGAAAATCGCCGACCGGCTACGCCGCGGCCGCCATCTACGCCGCCTCGCTTCTGTGCAACGAAAAGAAGACCCAGCGTGAGGTCGCCGACGTCGCCCAGGTGACCGAAGTCACCATCCGGAACCGCTACCAGGAACAGATCGAGGCGATGGGCATCCACTCCTGA
PROTEIN sequence
Length: 322
MTRPTRQRERTRQEAAEDVDGDETAVCPECNSEEILKDADRGELVCDGCGLVVEEDHIDPGPEWRAFNHSERQEKSRVGAPTTRTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASAQGVPRSVREVASVIYRRALDDDLIRGRSIEGVATAALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMEPVDPTKYVPRFCSELELPEEVQTKASEIIETTSEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIHS*