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sw_12_scaffold_7273_6

Organism: SW_12_Halobacteriales_69_24

partial RP 16 / 55 MC: 2 BSCG 13 / 51 MC: 2 ASCG 27 / 38 MC: 1
Location: 3301..3723

Top 3 Functional Annotations

Value Algorithm Source
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LXW7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 141.0
  • Bit_score: 217
  • Evalue 9.30e-54
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:EMA38296.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiform similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 141.0
  • Bit_score: 215
  • Evalue 3.80e-53
epf1; mRNA cleavage and polyadenylation specificity factor-like protein similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 141.0
  • Bit_score: 210
  • Evalue 3.20e-52

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Taxonomy

Halobiforma lacisalsi → Halobiforma → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 423
GTGAAGCTGCAGTTCCTCGGCGGCGCCCGCGAGGTGGGTCGGAGCGCGCTCCTGGTCGACGACTCGCTGCTCCTCGATTTCGGCATCAAGACCGGCGACCCGCTGCAGTACCCCGTCGGGCCGTTCGGCGGTCCGGGCGCCGACGCGCCGGAGGCGGTGGTCGTCACCCACGGCCCCCTCGACCACGCCGGCGCGGTGCCGGCGCTTTTGTCCGGCGATGCCCGGCCGACGGTCCACTGGACGCCGCCGACGCGCGAGCTGGCGCTGACGCTCGCACGGGATACGCTCAAACTGCACGGAGGGTCGTACAATTGCCCCTTCACTGAACCCAATCTCAAACGTGTTACACAGGTTTCGAGAACGCACGGGTATCGGGAGCCCTTCGAAGCCGCCGGCTACGACGTGACGTTCTACGATGCAGGA
PROTEIN sequence
Length: 141
VKLQFLGGAREVGRSALLVDDSLLLDFGIKTGDPLQYPVGPFGGPGADAPEAVVVTHGPLDHAGAVPALLSGDARPTVHWTPPTRELALTLARDTLKLHGGSYNCPFTEPNLKRVTQVSRTHGYREPFEAAGYDVTFYDAG