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sw_12_scaffold_10824_6

Organism: SW_12_Halobacteriales_68_16

partial RP 27 / 55 MC: 7 BSCG 17 / 51 MC: 3 ASCG 18 / 38 MC: 2
Location: 2338..3018

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 226.0
  • Bit_score: 362
  • Evalue 5.30e-97
tRNA-splicing ligase RtcB n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J295_HALJB similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 226.0
  • Bit_score: 362
  • Evalue 3.80e-97
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 226.0
  • Bit_score: 362
  • Evalue 1.10e-97

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Taxonomy

Halalkalicoccus jeotgali → Halalkalicoccus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 681
ATGACCGACGCCTTCGACGCCGACGGGATCACCCTCCACCGGCTCCGGGAGCACGTCTGGGAGATCGACCGCGAGGGCGACATGCGCGTTCCCGGCCGCGTACTCGCCAGCGAGGCGCTCCTCGAGGAGATAAAGGAGGATCGCACGCTCACCCAGTTGCAAAACACCACGCACCTCCCCGGGATCGAAAAGTACGCGATCTGCATGCCAGACGGCCACCAGGGGTACGGCTTCCCGGTCGGCGGCGTCGCCGGCATCGACGCCGAGGACGGCTGCATCTCGCCCGGAGCGGTCGGCTACGACATAAATTGTGGAATTAGATTGATACGAACGAACCTATCGTACAGTGACGTGCGTGGACGGGAGAATGAACTTGCCGACGCTCTTTTTAACAATATACCATCAGGTCTCGGCGGCGGCGGCGTCGTCGAGTCCGACGTCAACACGGTCGAGGAGATCCTCGACCGGGGGATGGACTGGGCCCTGGAGAACGGGTACGCGGTGCCGGAGGATCTCGAACACTGCGAGGACGAGGGCGCCTTCGACCGGAGCGATCCCGCGAAGGTGTCGGCGGAGGCGAAAAACAGGGGCAAGAGTCAGATCGGATCGCTGGGGTCGGGCAACCACTTCCTGGAGGTCCAGCGCGTGACCGACGTGTTCTTGGACGGCGTCGCCGATTAG
PROTEIN sequence
Length: 227
MTDAFDADGITLHRLREHVWEIDREGDMRVPGRVLASEALLEEIKEDRTLTQLQNTTHLPGIEKYAICMPDGHQGYGFPVGGVAGIDAEDGCISPGAVGYDINCGIRLIRTNLSYSDVRGRENELADALFNNIPSGLGGGGVVESDVNTVEEILDRGMDWALENGYAVPEDLEHCEDEGAFDRSDPAKVSAEAKNRGKSQIGSLGSGNHFLEVQRVTDVFLDGVAD*