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sw_12_scaffold_1246_3

Organism: SW_12_Halobacteriales_68_16

partial RP 27 / 55 MC: 7 BSCG 17 / 51 MC: 3 ASCG 18 / 38 MC: 2
Location: comp(1611..2069)

Top 3 Functional Annotations

Value Algorithm Source
Proteasome Rpn11 subunit JAMM motif protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ13_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 150.0
  • Bit_score: 227
  • Evalue 1.30e-56
proteasome rpn11 subunit jamm motif protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 150.0
  • Bit_score: 227
  • Evalue 3.60e-57
Proteasome Rpn11 subunit JAMM motif protein {ECO:0000313|EMBL:ADQ67758.1}; Proteasome rpn11 subunit jamm motif protein {ECO:0000313|EMBL:ELY23560.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 150.0
  • Bit_score: 227
  • Evalue 1.80e-56

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 459
ATGCCCAACCGGGTGATCGGCATCGCCGAGGACACCATCGAGTTCGTTCTCGACGCCGCCCGCGACGCCCACCCCGACGAGTACATGGGCCTTCTACGGGGCGAGCGCGCCCGCCGGGTCGGGATCGACCGGGACGGCCTCGTGGTGACGGACGTGCTCGTCATCCCGGGCACCACGTCGAATCCGACTAGCGCGACCGTCAAGACGAACATGATTCCTAATATGCGCCGGGTCGGGAGCGTCCACTCCCACCCCAACGGCGTCCTCCGGCCGAGCAACGCCGACCTGCAGACGTTCGGGACGGGAGAGGCCCACGTCATCCTCGGACACCCATACCGCCGCGGGGACTGGCGCGCCTTCGACCGCGAGGGCGAGCCCCGCGAGGTGCCCGTACTTGATGCGGATCTCCAGGATCCCGAGGAGTTTTTCGACTTCGACGAGTCGGATCTGGATCCGTGA
PROTEIN sequence
Length: 153
MPNRVIGIAEDTIEFVLDAARDAHPDEYMGLLRGERARRVGIDRDGLVVTDVLVIPGTTSNPTSATVKTNMIPNMRRVGSVHSHPNGVLRPSNADLQTFGTGEAHVILGHPYRRGDWRAFDREGEPREVPVLDADLQDPEEFFDFDESDLDP*