ggKbase home page

sw_12_scaffold_14657_2

Organism: SW_12_Halobacteriales_68_16

partial RP 27 / 55 MC: 7 BSCG 17 / 51 MC: 3 ASCG 18 / 38 MC: 2
Location: comp(194..706)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMY9_HALUD similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 167.0
  • Bit_score: 249
  • Evalue 2.70e-63
rps4p; 30S ribosomal protein S4P similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 167.0
  • Bit_score: 249
  • Evalue 7.50e-64
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 167.0
  • Bit_score: 249
  • Evalue 3.80e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhabdus utahensis → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 513
ATGGCACTCGGACGCAACACGAAGTTCTACGAGACGCCGAACCACCCCTACCAGGGCGAGCGCATCGGCGAGGAGTCGGGGTTGATCGGCAGGTACGGCCTGAAGAACAAACAGGAGCTGTGGCGCGCACAGTCGGAACTGCGCTCGATCCGCCGGGAGGCGCGGGACCTGCTCGCGGAGTTCGAGTCCGCCGCCGGCGAGGAGCAGTTCCTCGCGCGCCTAGAGCGGTACGGCATTCTCGACCCCAACGACGGGCTCGGTGACGTGCTGGCGCTCGACGTGACCGACATCCTGGAGCGCCGCCTCCAGACGGTCGTGTACCGCTCGGGGCTGGCGAACACGCCCGACCAGGCACGCCAGTTCGTCTCCCACGGCCACATCCGCGTCGACGGCCAGCGCGTCCGCGAGCCCTCCTACACCGTCGAACTCGACGAGGAGGACGCGATCGAGTTCGACCAGTACAGCCCGCTCGCGGACGAACTGCACCCCGAACGCGCGGAGGGCGAACAATGA
PROTEIN sequence
Length: 171
MALGRNTKFYETPNHPYQGERIGEESGLIGRYGLKNKQELWRAQSELRSIRREARDLLAEFESAAGEEQFLARLERYGILDPNDGLGDVLALDVTDILERRLQTVVYRSGLANTPDQARQFVSHGHIRVDGQRVREPSYTVELDEEDAIEFDQYSPLADELHPERAEGEQ*