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sw_12_scaffold_6945_3

Organism: SW_12_Halobacteriales_68_16

partial RP 27 / 55 MC: 7 BSCG 17 / 51 MC: 3 ASCG 18 / 38 MC: 2
Location: comp(2557..3279)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase beta subunit n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQW1_HALLT similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 325
  • Evalue 4.10e-86
DNA-directed RNA polymerase subunit beta'' similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 325
  • Evalue 1.20e-86
RNA polymerase beta subunit {ECO:0000313|EMBL:ACM55713.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (st similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 325
  • Evalue 5.80e-86

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Taxonomy

Halorubrum lacusprofundi → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 723
GGCCTGCTCGAAGTCTCCTTCCCCTCCGTATCGGGGTCGATCGACTTCACCACCCTGGTGCGGGCGCTCGGGCTGGAGTCCGACGAGGAGATCGTCCACCGGGTTTCGGACGACCCCGAGATCGTGAAGTTCATGCTGGAGAACTTAGAGGAGGCGGAGGTCCAGACCCAGGAGGGCGCCATCGAGGAACTCGGCCAGCGCGTCGCCTCGGGCCAGGGCAAGAACTACCAGCTCAAGCGCGCCAACTACGTGATCGACCGCTACCTCCTGCCACACCTCCACGAGGAGGGCGTCCCCGAGGAGGACGTCCGGATCAACAAGTCGTACTACCTCTGTCGGATGGCCGAGGCGTGTTTCGAACTCGCCCTTGAACGGCGGGACGCCGACGACAAGGACCACTACGCGAACAAGCGCCTCAAGGTCAGCGGCGACCTGATGCAGGACCTGTTCCGGACGGCGCTGAACAAGCTCGCCAGGGACGTGAAGTACCAGCTGGAGCGCGCCCACATGCGCAAGCGACGGGCAACTGGGTGGGCGGCCGGTCGGGCGTCTCCCAGTTGGTCGACCGGACCGACCACATGGGCGTCCTCTCGCACCTCCGGCGGCTGCGCTCGCCGCTCAGTCGCAGCCAGCCTCACTTCGAGGCGCGTGACCTCCACGCGACCCAGTGGGGCCGGATCTGTCCCTCCGAGACCCCCGAGGGACCCAACTGCGGCCTGGTGA
PROTEIN sequence
Length: 241
GLLEVSFPSVSGSIDFTTLVRALGLESDEEIVHRVSDDPEIVKFMLENLEEAEVQTQEGAIEELGQRVASGQGKNYQLKRANYVIDRYLLPHLHEEGVPEEDVRINKSYYLCRMAEACFELALERRDADDKDHYANKRLKVSGDLMQDLFRTALNKLARDVKYQLERAHMRKRRATGWAAGRASPSWSTGPTTWASSRTSGGCARRSVAASLTSRRVTSTRPSGAGSVPPRPPRDPTAAW*