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sw_12_scaffold_155_18

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: comp(14852..15625)

Top 3 Functional Annotations

Value Algorithm Source
DNA binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWB3_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 256.0
  • Bit_score: 183
  • Evalue 2.10e-43
DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 256.0
  • Bit_score: 182
  • Evalue 1.70e-43
DNA binding protein {ECO:0000313|EMBL:ELY26224.1}; Predicted DNA binding protein {ECO:0000313|EMBL:ADQ69333.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 256.0
  • Bit_score: 182
  • Evalue 8.50e-43

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 774
GTGATCGAGGAATGTCTAGTCGTCGAGTTCCGGGTCGTCGGCGACGAGTGCCCGCTCGCGGCGGCCTCGCGTGCCACCGGAACGACGATCGACGCCCGCCCACCCCAGCGCCGCGCGGACGGAACTGTTCTGTTGCGATTCAGCGCGCCACCGAACGATACCCTGGCTACCGTTCTCGACGCCGACGATCGGATCCGCTACCTGCACGCCGCGAGCGCCGAGGACCGGACGAACTACCGGTGTCTCGCGACGGCTCCCTGTGTCGCCCACCGACTCACCGACGCCGGTCTGCTCGCCGAGTCGCTTCGCTACCGCGAGGGCGTCGAGCGCCACAGCGGTGCGGTCATCGGCTACGACGTCCTCCGGGACGTGCTCGAAGCCGCCGGTGAGTACAACGCCACCGACCCCGATGCCGACCGCTCGCCCGACACCACTGGATCGACCGACCGAACCGACCTGACTACCGAAAACGATCCCGAGTCGGGCGACGCCGACGCTCACGTCCATCGGGAGGACGGAACGGACGGCATCGGGGTCACCGTCGAGCGCGTCTATCCCCTACGGAGCAAGGACGATTCGCCGGTCGCACGACGGTTCGACCTCACGCCCGCTCAGGCGAGCGCCATCGAGACGGCCCTCGAAACGGGGTACTTCGCGGTCCCGCGTGCGTGTACGGCGAGCGACGTCGCCGAGGAACTCGGAATCGGCAAATCGGCCTTTCTCGAACGGCTCAGACGCGGCCAGGCACGACTGTTGGCCGGCCTGTTCCCCTGA
PROTEIN sequence
Length: 258
VIEECLVVEFRVVGDECPLAAASRATGTTIDARPPQRRADGTVLLRFSAPPNDTLATVLDADDRIRYLHAASAEDRTNYRCLATAPCVAHRLTDAGLLAESLRYREGVERHSGAVIGYDVLRDVLEAAGEYNATDPDADRSPDTTGSTDRTDLTTENDPESGDADAHVHREDGTDGIGVTVERVYPLRSKDDSPVARRFDLTPAQASAIETALETGYFAVPRACTASDVAEELGIGKSAFLERLRRGQARLLAGLFP*