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sw_12_scaffold_1685_17

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: comp(17690..18211)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N635_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 170.0
  • Bit_score: 288
  • Evalue 5.30e-75
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 170.0
  • Bit_score: 288
  • Evalue 7.40e-75
transcription factor similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 171.0
  • Bit_score: 285
  • Evalue 9.70e-75

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Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 522
ATGGCGTTCGAGGAGCTACTCGAAGACCCCGTCATCCAGACGTACCTCCACGAACTCGTCGGCCCTCATGGGATGCCCGTCGCCGCCGCGCCACCCGACGGCGAGGTGACCGACGAGGAACTCGCCGAGGACCTGGATCTCGAACTCAATGACGTGCGCCGCGCGCTTTTCATCCTCTACGAGAACGATCTCGCGACTTACCGCCGGCTGCGCGATGAGGACTCGGGGTGGCTCACCTATCTCTGGACCTTCGAGTACGATCAGATACCCGAACAGCTAGAGGAAGAGATGCACAAGCTCCTAAAGGCGCTCGAAGAACGCCGGGCGTACGAACGGAACAACGAGTTCTACCTCTGTGAGGGAGAAGGCGTGCGCTATGAGTTCTCCGAGGCAATGGACTTCGGCTTCGAGTGTCCCGACGGCTCGGAAATGGAACCGATGGACAACGATCACTTGATCGAGGCAATGGATCGGCGGATCGCCGAACTCCGCTCGGAACTCAACGTCGAACTCGAGGCGTAG
PROTEIN sequence
Length: 174
MAFEELLEDPVIQTYLHELVGPHGMPVAAAPPDGEVTDEELAEDLDLELNDVRRALFILYENDLATYRRLRDEDSGWLTYLWTFEYDQIPEQLEEEMHKLLKALEERRAYERNNEFYLCEGEGVRYEFSEAMDFGFECPDGSEMEPMDNDHLIEAMDRRIAELRSELNVELEA*