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sw_12_scaffold_2101_3

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: comp(2648..4519)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N400_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 511.0
  • Bit_score: 750
  • Evalue 1.00e-213
PAS domain S-box {ECO:0000313|EMBL:EMA52273.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552 similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 511.0
  • Bit_score: 750
  • Evalue 1.50e-213
PAS domain S-box similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 602.0
  • Bit_score: 341
  • Evalue 4.10e-91

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Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1872
ATGCTCTCGATGACATCGGGCTACACCCGCGCGGAGATCGAGGCGATCGACCCGAAGCAGCTCGTCCCCAAGGAACAACACGAGTACGTCCCTGGGCTAGCCGAACCCGTCGAGTCACTCGACGACCGACGGATCGAGCTCGACCTCCTCACCCGCAGCGGCGAGCGTATCCCGCACGAGTTCCGTGGATCGACGTTCGAGAACTCGGAAACCGGCCGCCGTTTTCGGTGTGGTATCGCCTGGGACATCCGCGATCGCTTGGAGCGCGAACGGGAACTCCGTACCGCTCGCCGGTTCAACGAGGAACTGGTCGAGAACGCCCCGTTCGGTATGTTCCGCCTCGACGAGGACCTCCGAATCACGTACGAAAACCCGCGAGCGGAGGAGATCATCGGGCTCCCCGACAACGAGGAGTCGTCGAGTGCGATCGGGGCGAAGATCCACGAACTCCCACCGATCGTCGAGACTGGCCAGGCGGCCCTCTTCACGCGCCTGAACGACGGCGAGACGATCGAGTTCGAGTTTCCCTTCGAGTCGATCTACGGCAAGGAGGCGTACTTCGTTGGCCGCGGCGTGCCGCTGTATCGGGACGGCGAGTTCGACGGAGCGATTCTGATGGCCATCGACATCTCCGACCGGAGACGACAGGAGCGGAACCTGGAACGCCAGCGCAACGAACTCGACACGCTCAATCGCATCAACGATCTCCTCTTAGAACTCACCCGGGAGCTGCTCGAGTCGCCAACGCGCGAGGAACTCGAGCGAACCGTCTGTAAGCGCCTCGCGGCCTCGACGCTCTATCAGTTCGCGTGGATCGGCGAACTCGGAGCCGATAACCGGCGACTCGTTCCCCGAACGAGTGCCGGCGTCGACGACGGCTACGTCGAAGCAGTTACGATCACGGCCGATGAGACCGGGACGGGGCAAGGGCCCGGCGGTCGGGCGCTCCGGACCAAGGACGTACAGGTAAGCCAGAACATCCGCACTGATCCGGCGTTCGAGCCGTGGCGCGAGGCCGCACTCGACCGCGGTATCCAGTCGGCTGCCGCGGTCCCACTGTTCCATGGAGGAACGACGTATGGTTGCTTAGCGGTGTACAGCGCTCGACCGTTCGGGTTCAGCCAGCGCGAGCAGGCCGCCTTCGAGGTACTCGGCGAGGCGGTCGGGTTCGCGATCCACGCTATCGAGACTCGACGGTTGTTGTTCGCCGACGCAGTCCTCGAACTCGAGTTCCAGTTCGCCGGCCCGGACCAGTTTCTCCTCCGTCACTCCGAGCGCTTCGAGTGTGACTTCTCGGTGGAGGGGTACGTCGCCACCAAATCGGGGGGGTGGTCGCTCTACGTGGGCGTCGAGAACGCGTCGCCCACGGCGCTGTGCGAGGCGGCCGCCGACATCGATACGCTCGAACGCGTCCGCGTCGTCCGTGCCGCCCCCGACGAGGGCTTGCTGGAGTATCGGTTCGGCGAATCGCCCCTGCTGGAGACGCTCGCGGAGGCCGGCGTCAAACTCCGGTCGGCCGCAGCGACCGCGGGGATCGGTCGGTTCGTGGTCGAAGCGCCACGGAGCGCGGACGTCCGCGAGGTGGTCGATCGGGTCCGAGACGTCTACCCGACCGCAGAACTGCTCGCCCAACACGAGCGCGATCGGTCGGTGGCGGCGGTGGCGGTGCCCGGTGGTCCGTTCGGCGACCTCACCGAGTGTCAGCGCGAGGCGCTCGAAGCGGCCTACCGGGCGGGCTACTTCGATTGGCCACGCGAGAGCACCGCGGAGGAGGTCGCCGACAGCTTGGAAGTCAGTTCACCGACACTGCACAGACACCTTCGACGCGCCGAAAAGCGGCTCCTCGCCGCCTTTTTCGACGCCGACTCGTAG
PROTEIN sequence
Length: 624
MLSMTSGYTRAEIEAIDPKQLVPKEQHEYVPGLAEPVESLDDRRIELDLLTRSGERIPHEFRGSTFENSETGRRFRCGIAWDIRDRLERERELRTARRFNEELVENAPFGMFRLDEDLRITYENPRAEEIIGLPDNEESSSAIGAKIHELPPIVETGQAALFTRLNDGETIEFEFPFESIYGKEAYFVGRGVPLYRDGEFDGAILMAIDISDRRRQERNLERQRNELDTLNRINDLLLELTRELLESPTREELERTVCKRLAASTLYQFAWIGELGADNRRLVPRTSAGVDDGYVEAVTITADETGTGQGPGGRALRTKDVQVSQNIRTDPAFEPWREAALDRGIQSAAAVPLFHGGTTYGCLAVYSARPFGFSQREQAAFEVLGEAVGFAIHAIETRRLLFADAVLELEFQFAGPDQFLLRHSERFECDFSVEGYVATKSGGWSLYVGVENASPTALCEAAADIDTLERVRVVRAAPDEGLLEYRFGESPLLETLAEAGVKLRSAAATAGIGRFVVEAPRSADVREVVDRVRDVYPTAELLAQHERDRSVAAVAVPGGPFGDLTECQREALEAAYRAGYFDWPRESTAEEVADSLEVSSPTLHRHLRRAEKRLLAAFFDADS*