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sw_12_scaffold_272_1

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: comp(2..1054)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 351.0
  • Bit_score: 572
  • Evalue 4.00e-160
tRNA-splicing ligase RtcB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 351.0
  • Bit_score: 572
  • Evalue 2.80e-160
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 351.0
  • Bit_score: 555
  • Evalue 1.00e-155

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1053
ATGACCACCTACGACGCGGATGGCATCACCATGCAGAAGGTCCGCGAGCACGTCTGGGAGATCCCCCAGGAAGGCGAGATGGGCGCACCCGCACGGGTGCTCGCGAGCGAGGCGCTACTCGAAGAGATCGCCGACGATCGCACCCTCCAGCAGCTCACGAACGCCACGCAACTGCCCGGCGTGCAGAAACAAGCGCTCTGCATGCCGGATGGCCACCAGGGCTACGGCTTTCCGGTGGGCGGGGTCGCCGGTATCGACGCCGAGAGCGGCTGTATCTCGCCCGGAGCGGTTGGTTTCGACATCAATTGCGGCGTACGAATGGTGCGGACGAACCTCACCTATGGGGATGTCGAGGGCAAAGAGCGCGAGCTAGTAGAGGAGCTGTTCGAAGCGATCCCTTTGGGGTTGGGCGGCGGTGGGGTTCTCGAAACCGACGTCGGAACCGTCGAAGCGGTGCTCGAACGCGGGGTCGACTGGGCACGGGAAGCGGGCTACGCCACCGCCGAGGACCTCGCTCACTGCGAGGACGAGGGCCGACGAGAGGAAGCCGACGCCGATGCCGTCTCGGGGAAAGCCAAAGACCGCGCGAAAAACCAGTTAGGAAGTCTCGGGTCGGGCAATCACTTCCTCGAGGTCCAGCGCGTCACCGACGTCTTCCGCGCCGAGGTCGCGGATGCCTACGGTCTCAGCGAGGAGGATATCGTCGTCCTGATTCACTGTGGCTCGCGGGGCCTTGGCCACCAGGTCTGTACGGACTACGTCCGCCGGATCGAGGAGACCCATCCCGACTTGCTCGACGAGCTGCCGGACAAGGACTTAGCGGCAGCCCCAGCGGGTAGTGACCTCGCCGAAGAGTACTACCGGGCGATGGGCGCGGCGATCAACTTCGCGTGGGTGAACCGCCAGCTCATCACCCATCGCACTCGCCAGGCCTTCGAGGAGGTCTTCGACACCGACTGGGAGGCCCTCGGGATGGAGCTGCTCTACGATGTCGCCCACAACATCGCGAAGAAAGAGACACATAACGTTGACGGCGAGGATCGGGAGCTCTAC
PROTEIN sequence
Length: 351
MTTYDADGITMQKVREHVWEIPQEGEMGAPARVLASEALLEEIADDRTLQQLTNATQLPGVQKQALCMPDGHQGYGFPVGGVAGIDAESGCISPGAVGFDINCGVRMVRTNLTYGDVEGKERELVEELFEAIPLGLGGGGVLETDVGTVEAVLERGVDWAREAGYATAEDLAHCEDEGRREEADADAVSGKAKDRAKNQLGSLGSGNHFLEVQRVTDVFRAEVADAYGLSEEDIVVLIHCGSRGLGHQVCTDYVRRIEETHPDLLDELPDKDLAAAPAGSDLAEEYYRAMGAAINFAWVNRQLITHRTRQAFEEVFDTDWEALGMELLYDVAHNIAKKETHNVDGEDRELY