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sw_12_scaffold_3778_10

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: comp(7393..8298)

Top 3 Functional Annotations

Value Algorithm Source
idsA_3; trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase ) (EC:2.5.1.1 2.5.1.10 2.5.1.29) similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 301.0
  • Bit_score: 390
  • Evalue 4.80e-106
Geranylfarnesyl diphosphate synthase; Short=GFPS;; EC=2.5.1.81;; Farnesylgeranyl diphosphate synthase; Short=FGPP synthase;; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 301.0
  • Bit_score: 390
  • Evalue 2.40e-105
Geranylfarnesyl diphosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GFPS_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 301.0
  • Bit_score: 390
  • Evalue 1.70e-105

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 906
GTCGCGGAAGCGCTCTGTGGAATCGAACCCCTCTCCCGCGATTACCGACAGTTCCCGACGCTGGCCGATGGGGAACGAACGGGAACCGAGACCAGTAGTGCCGGCAGCGAGGACGGCCCCGAGATCGACCTCATGACTGCCGCGGCGGGCATCGAGGTCATCCAGTCCTTTACCCTGATCCACGACGACATCATGGACGACGACGACCTCCGTCGGGGAGTGCCTGCGGTTCACCGCGAGTACGACCTCGAAACGGCGATCCTCGCGGGCGATACCCTCTATGCGAAGGGTTTCGAGTTCATGGTCGAGAGCGGCGCACCCCCCGAGCGCAGCGTGCGGGCGCTGCGAACGCTCGCGAGGACCTGTACGAGCATCTGTGAGGGACAGGCAATGGACGTCGCCTTCGAGTCCCGCGAGGACGTCTCGATCGCGGAGTACCTACGGATGATCGAGCGCAAAACCGCCGTGTTGTACGCCGCAGCGGCGAGCGTGCCGGCGATCCTCGTGGGTGCGGACGACGCGACCGTCGGTGCGCTGTACGATTACGGCCTCGATATGGGCCGGGGTTTTCAAATCCAGGACGATCTACTCGATCTGACGACGCCGAGCGACCAACTGGGCAAGCGTCGCGGGAGCGACCTGATCGAGGGCAAGCGGACGCTGATCACGCTGCATGCCCGTGAACGGGGCATCGACGTCGAGGAGCTGATGACCGGGGAAGGAAGCGAGGCGGCCCTCGAAGCCGCGCTCGAACGCTTGGAGGCGGCCGGTAGCATCGATTACGCCCGCCGGAGCGCCCGGTCGTTCGTCCGAAGTTCGAAGTCGAACCTCGGGGTCGTCCCCAACAATGAAGCGCGGGATCTACTGGGCGGGATCGCCGAGTTCCTCGTCGAGCGCGGCTACTGA
PROTEIN sequence
Length: 302
VAEALCGIEPLSRDYRQFPTLADGERTGTETSSAGSEDGPEIDLMTAAAGIEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLETAILAGDTLYAKGFEFMVESGAPPERSVRALRTLARTCTSICEGQAMDVAFESREDVSIAEYLRMIERKTAVLYAAAASVPAILVGADDATVGALYDYGLDMGRGFQIQDDLLDLTTPSDQLGKRRGSDLIEGKRTLITLHARERGIDVEELMTGEGSEAALEAALERLEAAGSIDYARRSARSFVRSSKSNLGVVPNNEARDLLGGIAEFLVERGY*