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sw_12_scaffold_6102_7

Organism: SW_12_Halosimplex_carlsbadense_69_15

partial RP 8 / 55 MC: 1 BSCG 7 / 51 ASCG 15 / 38 MC: 1
Location: comp(4221..4769)

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle 54 kDa protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY84_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 118.0
  • Bit_score: 199
  • Evalue 2.60e-48
Suspect SCG annotation. See neighboring gene [sw_12_scaffold_6102_6]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 118.0
  • Bit_score: 199
  • Evalue 3.60e-48

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 549
ATGGTACTCGACGATCTCGGCAGTTCCCTCCGGAGCACGCTCAACGGCCTCCGGGGGCAGTCGCGTATCTCCGAGGAGGACGTCGAGGAGGTCGTCAAGGAGATCCAGCGCTCGCTCCTGCAGGCCGACGTCGACGTCGACCTGGTGATGGAGCTGTCGGACAACATCGAGTCGCGCGCGCTCGACGAGGAACCCCCGCCGGGCACCACGGCCCACGACTGGGTGCTCCGCGTCGTCTACGACGAACTCGTCTCCCTCGTCGGCGACTCGACGGAGTTGCCGCTGGAGCCACAGACGATCATGCTCGCCGGCCTCTACGGCTCGGGGAAGACGACCACCGCCGCCAAGACGAGCGCGCCGAGGTCGACTTCTACGGCGACCCCGACGCCGACGAGCCCGAGACCATCGCCCGCGAGGGGCTCGAAGCCACGGCCGACGCCGACGTCCGCATCGTCGACACGGCGGGCCGGGACGGCCTCAACCGGGAACTCATCGAGCAGATCGAACGCATCGACGACGTGGCCGACCCCGACCGGAACCTGCTGGTGA
PROTEIN sequence
Length: 183
MVLDDLGSSLRSTLNGLRGQSRISEEDVEEVVKEIQRSLLQADVDVDLVMELSDNIESRALDEEPPPGTTAHDWVLRVVYDELVSLVGDSTELPLEPQTIMLAGLYGSGKTTTAAKTSAPRSTSTATPTPTSPRPSPARGSKPRPTPTSASSTRRAGTASTGNSSSRSNASTTWPTPTGTCW*