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sw_12_scaffold_13558_2

Organism: SW_12_Nanohaloarchaea_43_5

partial RP 5 / 55 BSCG 5 / 51 ASCG 2 / 38
Location: 1039..1272

Top 3 Functional Annotations

Value Algorithm Source
like-Sm ribonucleoprotein core; K04796 small nuclear ribonucleoprotein id=18312061 bin=Haloredivivus tax=Haloredivivus similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 78.0
  • Bit_score: 98
  • Evalue 3.50e-18
Like-Sm ribonucleoprotein core {ECO:0000313|EMBL:EHK00710.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 77.0
  • Bit_score: 98
  • Evalue 4.80e-18
small nuclear ribonucleoprotein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 71.0
  • Bit_score: 74
  • Evalue 1.50e-11

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Taxonomy

Candidatus Haloredivivus sp. G17 → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 234
ATGGGAAACGATGACAGTGGAAAAAGACCTTTAGACGTACTAGATACTGCAAAAGGTGACAGAGTAATAGCAAAACTAAAAGGAGGACAAACAGTTTCAGGCAACCTGAAAGCATTCGACCTTCATCTAAACATGTGGCTTGAAGATGCCTCCGTAAACGAAGATGGAGGACAAACAGACTACGGAAAACTGATCATCCGTGGAGACAACGTAATACTGGTCAGCCCTGAATAA
PROTEIN sequence
Length: 78
MGNDDSGKRPLDVLDTAKGDRVIAKLKGGQTVSGNLKAFDLHLNMWLEDASVNEDGGQTDYGKLIIRGDNVILVSPE*