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sw_12_scaffold_19006_1

Organism: SW_12_Nanohaloarchaea_43_5

partial RP 5 / 55 BSCG 5 / 51 ASCG 2 / 38
Location: 3..542

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp42 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFQ6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 176.0
  • Bit_score: 206
  • Evalue 2.10e-50
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).; similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 176.0
  • Bit_score: 206
  • Evalue 2.90e-50
rrp42p; exosome complex RNA-binding protein Rrp42 similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 148
  • Evalue 2.50e-33

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Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 540
CACAGAGAATACGAGTCAGGACCACCCCAGGAAGATGGAGTAGAACTCGCAAGAGTCGTTGACAGAGGAATCAGAGAAGCAGAAGCAGTTGGCCTTGAAGAACTATGTATTAAATCAGGAGAGAAAGTAATGACATTATTCATCGACGCACACATCCTGAACGACGATGGAAGCCTGATTGATGCATGTTCGCTAGCAGCAATGGCTGCACTCAAGACAGGGACACTTCCAGAGTACGATGAAGAGACAAACACCCTCAAAAGAGACAATAGGGAAAGAGAAATTCCACTTCAGGAAGAACCAGTAACAGTCACAGCTCACAAGATAAACGGCGAAATAGTCTGGGATACGACAGGAGCGGAGGAAGATGCACAGGGTTCAAGACTAACAGTCTCAATTAACGAACACGGAAACATTGTCGCCATGCAGAAGGGAGAAACCCATCCATTCACACAGCAGGAGATCATGGACATCGTAGACGAAGCAGAGAACAAAACCGGGAAACTACGAGAGCAGCTGGAAACTGCGACAGGAGAATAA
PROTEIN sequence
Length: 180
HREYESGPPQEDGVELARVVDRGIREAEAVGLEELCIKSGEKVMTLFIDAHILNDDGSLIDACSLAAMAALKTGTLPEYDEETNTLKRDNREREIPLQEEPVTVTAHKINGEIVWDTTGAEEDAQGSRLTVSINEHGNIVAMQKGETHPFTQQEIMDIVDEAENKTGKLREQLETATGE*