ggKbase home page

sw_12_scaffold_12347_1

Organism: SW_12_Bacteroidetes_Order_II__Incertae_sedis_63_10

partial RP 27 / 55 MC: 1 BSCG 27 / 51 MC: 3 ASCG 3 / 38
Location: 2..1465

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0REY7_CELLC similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 501.0
  • Bit_score: 303
  • Evalue 3.40e-79
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 501.0
  • Bit_score: 305
  • Evalue 3.30e-80
TonB-dependent receptor plug {ECO:0000313|EMBL:ADY29962.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lyt similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 501.0
  • Bit_score: 303
  • Evalue 4.80e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cellulophaga lytica → Cellulophaga → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1464
GTCGCGGCCGACCACGGCGACGGGGAACTGGTCGGACGGGCGGTGGAGTACCTCCGCGCCAACCGCATTCGCACGCGCCTGGCGCAGGAGGCCGCGCGCGTCACGCAGGACCTCGCGCTGGTGCAGGACGTGCAGGAGCTCGAAGAGGTTGTCGTGACTGGAGTCTCGCAGGGGACTCAGACGGCAAAGCTGGGATTTTCTGTAGAGAAAGTCGAGGGGGAGGACATTAACAAGGTCCCGAGCACGGACCCTGCCAATGCACTCCGTGGAAGAGTTTCGGGGGCACAGATCATCCGGCCGTCGGGAGAGCCGGGGTCGTCCCCAAATATTCGGCTTCGAGGAACCACCGCGCTGCAGGGATCGCAAGAACCGCTCATTGTGGTGGACGGCGCGATCACACAGGGCTCTCTTGAGGACATCGATATGCAGAATGTCGAATCCATTGAGGTCATCAAGGGTGCTGCGGCTGCATCTCTCTACGGATCGCTCGCCGCTAACGGAGTAGTTCAGGTGATTACCAAGCAAGGATCCGGAGAAGCAGGAGAGACTCGCGTTACGGTCCGCAATGAGTTTGGCACAAACCAGCTTGCGAACAAGATCCCAACTGCGGATCATCATCGGCGCCAGGGGTCGTATCGTCCGCTTGCCAGTGAGAGCGACGAGTGTGATTTTAACCCTTGCGCCCCGAATCCGCTCGCTGAGGATGACGTGATCGACAATGCGTACGAACGAGAGACATTTGACAATCAGGAGCGACTCTTTGGGGGAAACGAGTTCATGACGAACTACGTTGAGCTGTCCTCCACGCAGGAGGATCTGCGATATACCCTTTCGTTTGAGAACCTTGAGCAGGGAGGCGTCGTCCGGGAGCTTAACAACTACAGTCGCCGCAACTTCCGCGTGAATCTTGGGAACGACATTCGGGAGTGGGCGACCGTCCAAGTTTCGAGCCTTTACTCCAGGCGGAAGGGCCCGGACGTGACGGAGCAAGGACAGGGGGGAAACCCCTTCTACAGTACCCTCATTGCTCCAAAAGATCTCGACCTGGCGGCTTCTCCCCCGGACTCGCTGGACATCGATGCGGAATACAACCCGTTCACGAACTCGGGGAATGCAGGAAACCCCCTGTACGAGTTGGCAACAGACAATGACGAGATCGACGAGGAGCGCCTGTTCGGAAATATCCGTCTCAACCTGGATCCAACCGACTGGCTGACGGTGAATGGGCAATTCAGCTATGACCGTGAAGAGGACGATTTCAACACGTTCACGGAGGTTGGCACACAGCCCGCCTCCCCGACGGGCACTCCCTCGCAGGGGTTTGTTTTCCGGTCCAAGGACTTTGAACGGTTGTACATCGCTGAGGGAAGCTTTACGCTGCAACAGGACATAGCCGACCTTAACGCCCAACTCACCGGACGGTACAACTACGAGAACCGAACTGGCGACTTCGTCAATGTCTCC
PROTEIN sequence
Length: 488
VAADHGDGELVGRAVEYLRANRIRTRLAQEAARVTQDLALVQDVQELEEVVVTGVSQGTQTAKLGFSVEKVEGEDINKVPSTDPANALRGRVSGAQIIRPSGEPGSSPNIRLRGTTALQGSQEPLIVVDGAITQGSLEDIDMQNVESIEVIKGAAAASLYGSLAANGVVQVITKQGSGEAGETRVTVRNEFGTNQLANKIPTADHHRRQGSYRPLASESDECDFNPCAPNPLAEDDVIDNAYERETFDNQERLFGGNEFMTNYVELSSTQEDLRYTLSFENLEQGGVVRELNNYSRRNFRVNLGNDIREWATVQVSSLYSRRKGPDVTEQGQGGNPFYSTLIAPKDLDLAASPPDSLDIDAEYNPFTNSGNAGNPLYELATDNDEIDEERLFGNIRLNLDPTDWLTVNGQFSYDREEDDFNTFTEVGTQPASPTGTPSQGFVFRSKDFERLYIAEGSFTLQQDIADLNAQLTGRYNYENRTGDFVNVS