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sw_12_scaffold_10301_2

Organism: SW_12_Viridiplantae_56_8

partial RP 27 / 55 MC: 9 BSCG 13 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(1181..2620)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K03514 DNA polymerase sigma subunit [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 475.0
  • Bit_score: 187
  • Evalue 1.10e-44
Uncharacterized protein n=1 Tax=Citrus clementina RepID=V4UGA8_9ROSI similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 441.0
  • Bit_score: 195
  • Evalue 9.90e-47
DNA polymerase sigma subunit {ECO:0000313|EMBL:JAC78883.1}; Flags: Fragment;; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetra similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 457.0
  • Bit_score: 197
  • Evalue 4.80e-47

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1440
AAGCGCTCCCGCCCACCACTCCGCGAGGAGCGCACAGATCGCCAGCAGCAGAGCCCTTCCGATAGAAGCACCACTTTTTTGCATGAGGAGATTGTGCGCTTCTGCAACGCTGCCAACCTCTCTGAGCGGGAGAAAGCCACCCGCCACTCCGCCCTTCACGACCTCCAAAGTTGCGTCGCGCTCCTCTGGCCCCGCGCCTCCGTCCAGCTTTTCGGCAGCCAGGCCACCGGTCTCGCTCTCCCCAACTCTGATGTTGACGTCGTCGTCCTAGGCGAACACCCCGCCTCCAGCGAGCAGCAGCAGCCTGGCGGTGGCTTCGGCATCTGCGCCCGCCACCGCGTCTGCCGCGCACTCTACCAGCTCAGTTACCACCTCAAGCGCCACGGCGTTGTGCATTCCACCTCCGTCATCAATGCCAAGGTCCCGATCTGCAAGTGCACCCTCTCCCGCAGCGGCCTTGAGTGTGACTTGTCTCTTGGCGCTCGCAACGGCGCCAACGCCGTTGAGTTCATCTCCTCCCTTGTGCACTCCCTCCCTCCGCTCCGCCCGCTCTGCCTCGTTCTGAAGGCCTTCCTTGCTCAGAGAAACCTCAACGAGCCCTTCTACGGTGGCGTTGGGGGTTGGCAACTAGTTAACATGCTCTGCACGCACTTGCAAGCCGAAGGCGTCAATGTTGGCGAGGAGGTGGACCTCGGCTCCTGCCTGATGGCTTTCTTCCATCGCTTTGGCGGCAGCCTTGACACGTGGAAATATGCCCTCTCCATTGAGCGTGGAGGTATTGTGCGCAAGCGCGGCGCTCTGCTGAACCGGGCGAAGCCCTGGCGACTTGCAATTGAGGACCCTCAAGAGCCGAACAAAGACATTGGCGGGGCCATATTCAATATTGATGCAGTGAAACGTACGTTTGGTAACGCGTCCGTGAAGCTTAACAGCGCAAACGATGGTGAGGAGGCACTGGACTTGTGGGCTGAGGTGCAAGCAGAGTCGACGCACAGGAGCGTAGAGCCATACTCGAATACGGGTCGGCGTGTTATGCCTATGTTAAATAACATCATGAGCACGGAAGCAGCGCTAACGAGAAGAAGGGTGGGGCATGGGAAGGGAAGAGGCAAGAGAAAGAAGGAAAAGGAAAACAAGAAGCAAAAGTTTGGGACGATGGAGCAAGCGATCATGAAACAGCAAAAAGCTGAGAAAAAGAAGGAGACAGCGAAGAAGGGGAAAAAGGGAGCGAGTGCAAAGAGCGGAAAGAAAAGACAGACAGAAGGCAAGGAGTTTGCTAACAAGAAGAAGGAGGTGGGGAAGAAGAGTCAGAGCAAGGGAGCAATTGCAGAGAGCGAGAGGAGCTGCAACAAAAGGAAGGAGGTGGGAAAGCGGAAGAGGTTGACGTTGGGAGTGAAGAGAGAACAGAAGGCGAGGAGAGTGATGGAAACAAAGAGTTGA
PROTEIN sequence
Length: 480
KRSRPPLREERTDRQQQSPSDRSTTFLHEEIVRFCNAANLSEREKATRHSALHDLQSCVALLWPRASVQLFGSQATGLALPNSDVDVVVLGEHPASSEQQQPGGGFGICARHRVCRALYQLSYHLKRHGVVHSTSVINAKVPICKCTLSRSGLECDLSLGARNGANAVEFISSLVHSLPPLRPLCLVLKAFLAQRNLNEPFYGGVGGWQLVNMLCTHLQAEGVNVGEEVDLGSCLMAFFHRFGGSLDTWKYALSIERGGIVRKRGALLNRAKPWRLAIEDPQEPNKDIGGAIFNIDAVKRTFGNASVKLNSANDGEEALDLWAEVQAESTHRSVEPYSNTGRRVMPMLNNIMSTEAALTRRRVGHGKGRGKRKKEKENKKQKFGTMEQAIMKQQKAEKKKETAKKGKKGASAKSGKKRQTEGKEFANKKKEVGKKSQSKGAIAESERSCNKRKEVGKRKRLTLGVKREQKARRVMETKS*