ggKbase home page

sw_12_scaffold_2087_1

Organism: SW_12_Viridiplantae_56_8

partial RP 27 / 55 MC: 9 BSCG 13 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1..2265

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog C-like n=1 Tax=Cucumis sativus RepID=UPI0002B4CBD2 similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 795.0
  • Bit_score: 350
  • Evalue 3.80e-93
U3 small nucleolar RNA-associated protein 14 {ECO:0000313|EMBL:KFM25617.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.6
  • Coverage: 801.0
  • Bit_score: 381
  • Evalue 2.10e-102
U3 small nucleolar RNA-associated protein 14 homolog C-like similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 795.0
  • Bit_score: 350
  • Evalue 1.20e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Auxenochlorella protothecoides → Auxenochlorella → Chlorellales → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 2265
GCGCTCCTCGCAGAGCTGCCCGACGGCTTTGAGGACGAGGAAGTGGACGAAAACGCTGCACTGGAGCCTGGCGACGAGGAACTCACCGAGCGCTTCCGCCTCCACCCTGCCTCCGACGATGAGCTTGAGGAGGAAGACCGCGAGGAGGATGAAGAGGGTGGCAACGACGAGCTGAACCGCCAGTCGCTCGTTTCAGACCTCCAGCGCTCTGCTTCTGCCTCCGCTCGCTCGCGCGAGCAGCGCCGCGCAGTACGCACGGAGATTCTGCCTGAGAAGGCGGAAAACGCTTGCCTCAGCTCCGACCCGCTCAGCATCCAGGATCTCATCGACGCCGCTGGCACCGGCGAAGGCGGCGCTAATGGCCGTCTCCGCAAGCGCCTCTCCCGCCTCAACTCCGCTGCCAAGCCCGAAGAACCGCCCTTGCCTGAGCGTGTCCGTGCAAAGCAGGAGCGCAAGGCTGCATACGAGTGCTCTGCTGCCGATGTGGCCAAGTGGCAGGGCGCTGTGCAGGCTAACCGCAAGGCGCGCTCCCTTGACCTGCGCAAGGAGGAAGTTTCCCACCCCACAAATTCCACAGTCGGCAGCATTGCCTCTGATCACGCCCCAACTAGCGTGATGGAGCGCGAGGTTTCAGACCTCTTAAAGCAAGCTAGTGCAGAGCACGGCACCCAGAAGGCTGTTGAGGAGGAAGATGCTGAGCAGCTTGAGCGGATGAGCTTCGAGGAGGCAAAGCGGCGCAAGGATCGCCTTGCCAAAATGCGCGCTCTGCTTTTCAAGCACGAGGAACGCGCCAAGCGGCTGAAGCGCACCAGATCGAAGGCGAACAAACGTCGCGAGCGAAAGTCACGCAGGGGTCGAGAACAGCGCATAGGAAGCGAAATTGACGAGGATGAAGCGCGCAAAGCCCAGGAACAGGCGGAGTTCGATCGTGCGAAGGAGCGAATGACGCTGAAGCACCGGAATACCTCCCGCTGGGCCAAGCGCTCGATCAGGAAGGGCCTCAATAAACTGCCAGGCACAAAGGAGGCAATCAACGAGCAGCTACGCATCGGCGAGGAGCTAATGGAGCGTGTAAACCGGACGCAATCGCAACGGGAGAATAGTGACGAGCCTGATGCGGATGGAAACGACACAGAAAGTGAAGATGAGGATGAAACGGAAGAGGATAAGGCAACGGAGCGGAATGGTAAGTACAAAGAAAAGGAGAAGCAAGAAGCGCTCGACGTGATTAGCGGAAATGCTGATGCCGACAATGTGCCGTCCAATGGCCTCTTCTCACTTCCTTTCATGCGGCGTGCGATGGAGCGCAAGCAGGACGAGGCTAAGGAGGAGGCTAAGGAGATTCTCGAAGATGCCCAGGCAGATGAGTTTGGCGACGATGAGTGGCATGAGCGTGACGCCGCCAAGAGCAATGGTCAAGAAGTGCAATGTGAAAGCCCAGATGTTGCTGCTCAGCAGCAGCAGAAGCAGCAACAGCGGGAAGGTCAAAGCAATGTTGACCATAAGCAAGAACTCGAGGCTGGACAGCAGCTTTTTGATTCTCGCGCAGAGGGCGGCGCAGCGCATTCGCGCGAAATATTGAAAGGGCATGCGGCATCGAAAGGTGAAAGTGCCATTTCGTCGGGCAAGAGCAGATTGGCACAGTCTGTTTCAAATGCATCGAAGAAAACCACTGCACAAGTCACTGACAATTCGACAGATGTTGTAAGTGAAGAAGAACATGTACGCCAGGCTGCGCAGAGGGGTAGAAATGTTGCACAGGCACTGGAGCAGAACAAGACTGTTGGTGTTAGCGAGCAGCAGCGAGAGCTGATCAGCCAAGCGTTTGCGGATGATGATGTTGCTGACGAATTTGCGCAACAAAAGGAGCAAGTTCTGTACGGAGAGCTTCCCTCGGAAGAGGCAGAGGAAGCGTTGCCTGGATGGGGCGAGGGGGCTAGTAAGCAGAGAGGAGGGCCGAAATTCATCCAGAAGCAGCGTGAGGCCGATCGCAAGAAGCGAGAAGAAGCGCTCAAGAAGAGACGGGACGCGAAGAAGCCCAACGTCATTCTGTCGGAGCGATACGACAGGCTTGCTGCTCAGCATTCCGTACAGTCACTTCCGCATCCGCACAACTCTCGCGAAGCCTTTGACGCGAGCATGCGCGTGCCAATCGGTCGTGATTATAACAGCGATGCGGCATTCAGAGAATTCACTCGACCAGAGGTGTTGCAGCAGCCAGGCCAGGTGATTAAACCTATAGCACCTACTGCAAAAGCTCAGTAA
PROTEIN sequence
Length: 755
ALLAELPDGFEDEEVDENAALEPGDEELTERFRLHPASDDELEEEDREEDEEGGNDELNRQSLVSDLQRSASASARSREQRRAVRTEILPEKAENACLSSDPLSIQDLIDAAGTGEGGANGRLRKRLSRLNSAAKPEEPPLPERVRAKQERKAAYECSAADVAKWQGAVQANRKARSLDLRKEEVSHPTNSTVGSIASDHAPTSVMEREVSDLLKQASAEHGTQKAVEEEDAEQLERMSFEEAKRRKDRLAKMRALLFKHEERAKRLKRTRSKANKRRERKSRRGREQRIGSEIDEDEARKAQEQAEFDRAKERMTLKHRNTSRWAKRSIRKGLNKLPGTKEAINEQLRIGEELMERVNRTQSQRENSDEPDADGNDTESEDEDETEEDKATERNGKYKEKEKQEALDVISGNADADNVPSNGLFSLPFMRRAMERKQDEAKEEAKEILEDAQADEFGDDEWHERDAAKSNGQEVQCESPDVAAQQQQKQQQREGQSNVDHKQELEAGQQLFDSRAEGGAAHSREILKGHAASKGESAISSGKSRLAQSVSNASKKTTAQVTDNSTDVVSEEEHVRQAAQRGRNVAQALEQNKTVGVSEQQRELISQAFADDDVADEFAQQKEQVLYGELPSEEAEEALPGWGEGASKQRGGPKFIQKQREADRKKREEALKKRRDAKKPNVILSERYDRLAAQHSVQSLPHPHNSREAFDASMRVPIGRDYNSDAAFREFTRPEVLQQPGQVIKPIAPTAKAQ*