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sw_12_scaffold_2087_4

Organism: SW_12_Viridiplantae_56_8

partial RP 27 / 55 MC: 9 BSCG 13 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4007..4516)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein L13 n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0Z7W0_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 166.0
  • Bit_score: 146
  • Evalue 2.40e-32
Ribosomal protein L13 {ECO:0000313|EMBL:EIE26729.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.; similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 166.0
  • Bit_score: 146
  • Evalue 3.40e-32
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 110.0
  • Bit_score: 92
  • Evalue 9.00e-17

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 510
CTCGTGGGAAGACTTGCAGCACAGCTTTCAAAAGTGCTGCAAGGGAAGGACAAGCCCATCTTCCGCCCTGACAGGGACTGCGGCGACGTAGTTGTGTGCGAGCATGCCAGCGAGGTCTCCCTTACCCATTCCAAGTGGCGCGACAAGACATACGCTTGGCACACCGGCCATCGGCTCAAGCGCGAGCAAGCTGCTGATTTGCACAACCGCAAGCCCACCGCCGTGCTTGAGCGCGCTGTGTACGGCATGCTACCTAAGAATAACCTTCGTAAAGACCGCATGCGCAAGCTGCTGCTCTACCCGCACGCGCAGACCGACTTCGCCGATGAGGAGCTTGTTGACTGGCAGATGCCCTTCCGCAAGCGAAAGCGGGAGGACGTTGTACCGATTATGCCGGAGGGCTTCGAGCCGCTCAACCCGGACGAGCACGCGCGGAGACTGCAGTACGCGAGGAAGAAGGGCACAGTGGTGGAAGTGGATGAGGCAGAGCTGTTCAACAGCAGCGCTTAG
PROTEIN sequence
Length: 170
LVGRLAAQLSKVLQGKDKPIFRPDRDCGDVVVCEHASEVSLTHSKWRDKTYAWHTGHRLKREQAADLHNRKPTAVLERAVYGMLPKNNLRKDRMRKLLLYPHAQTDFADEELVDWQMPFRKRKREDVVPIMPEGFEPLNPDEHARRLQYARKKGTVVEVDEAELFNSSA*