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sw_12_scaffold_2023_5

Organism: SW_12_Viridiplantae_56_8

partial RP 27 / 55 MC: 9 BSCG 13 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(3329..3880)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N7D1_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 181.0
  • Bit_score: 255
  • Evalue 3.10e-65
U3 small nucleolar ribonucleoprotein IMP3 {ECO:0000313|EMBL:JAC69889.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmi similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 183.0
  • Bit_score: 260
  • Evalue 1.30e-66
ribosomal protein S4/S9 similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 151.0
  • Bit_score: 80
  • Evalue 6.50e-13

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 552
ATGAGGAAGCTCAAGTATCATGAGCACAAGCTTCTGAAGAAGGTGGATTTTCTGACGTGGAAGTCAGAGTCGAGCAAGCGCGAGGCCTCGGTGGTGCGTCGGTACCGGCTGCAGGACGCTGGTGACTACAAGAAGTACAACAAGCTGTGTGGGCTCGTCACACGGCTCGTCTCGCTTCTGAAGAAGATGGACCAGCGCGACCCCGTGCGCGAGGAATTGACAGAGAAGCTGCTGCTCAAGCTCTACCGCGTTGGCGCAATCCCCACACAGAAGTCGCTCGAGCAGTGCAACCGTCTCTCCGTGAGCAGCTTCTGCAGGCGACGCCTTGCCGTCGTGCTCGTGCGCTTAAATATGGCCGAGAGCCTGAAGGATGCATGCAAGTTCGTTGAGCATGGGCATGTCCGCGTCGGGCCAGAGCCCGTCACCAACCCCGCCTACCTCGTCACCCGTGACTTGGAGGACCATGTCACCTGGACGGACTCTTCCTCCATCAAGCGCAAGGTGCAGAAGTACAACGACAAACTGGACGATTTCGAACTTTTGCAAGCGTGA
PROTEIN sequence
Length: 184
MRKLKYHEHKLLKKVDFLTWKSESSKREASVVRRYRLQDAGDYKKYNKLCGLVTRLVSLLKKMDQRDPVREELTEKLLLKLYRVGAIPTQKSLEQCNRLSVSSFCRRRLAVVLVRLNMAESLKDACKFVEHGHVRVGPEPVTNPAYLVTRDLEDHVTWTDSSSIKRKVQKYNDKLDDFELLQA*