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sw_12_scaffold_2853_10

Organism: SW_12_Viridiplantae_56_8

partial RP 27 / 55 MC: 9 BSCG 13 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(6789..7631)

Top 3 Functional Annotations

Value Algorithm Source
60S ribosomal protein L5 n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YLE0_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 275.0
  • Bit_score: 325
  • Evalue 4.80e-86
60S ribosomal protein L5 {ECO:0000313|EMBL:EIE19209.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-16 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 275.0
  • Bit_score: 325
  • Evalue 6.80e-86
rpl18p; 50S ribosomal protein L18P similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 230.0
  • Bit_score: 137
  • Evalue 6.90e-30

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 843
GTGGCGGTGAGGAAGCGCAGGCGGCGGGAGGGCAAAACCGACTATCACTCCCGGAAGAAGCTGATCCAGCAGGACAAGCGCAAGTACAACACTCCAAAGTATCGCCTCGTCGTTCGCTTCACCAACACCCAATGCATCTGCCAGATTGTCACACAGCAGATGGCCGGTGACAAAGTTGTCGAGGCTGCGTACGGTAAGGAGCTAACTCACTACGGCCTCCCCGTCGGCCACAAGAACTACACCGCCGCCTACTGCACCGGCCTCCTCCTCGCCCGCCGCCTCCTCCGCAAGCTCGGCCTTGACGAGACGTACGAGGGCCAAACCGAAGTTGATGGCGAAGACTACCACGTCGAGCCCGCTGAGGAAGGGCCCCGGCCTTTTCGCGCCTACCTCGATGTCGGCCTCGCGCGCACCTCGACCGGCGCACGCGTATTCGGTGCGCTGAAAGGCGCTTGCGACGGCGGCCTTGACATCCCCCATAATGAGAAGCGCTTCGCTGGATATCTCACGGAAGAGAAGAAGCTCGACACTGAGCTCCACCAGGGCTACCTGCTTGGCCGCCACGTTGCTGAGTATGCGGAGAACCTTGAGGAGGAGGAGCCCGAGAAGTACAAGCGCCAGTTCGCCAAGTACTTCGAAAATAATATCAACCCCACAGAGCTCGAGGACCTCATCCCTGAGGTGCACGAGAAGATCCGCCAGAATCCTGAGCGCCAAACCACCCGCCGTCCGCCACCTCCGCCGGAGAAGCGCAAGCGCTGGAAACAGCGCAAGCTCACCACCGAGGAGCGCAAGGCCAACTTGCGTGCGAAGCTCGAAGCCCTCAAGGAGATGGCCGACTGA
PROTEIN sequence
Length: 281
VAVRKRRRREGKTDYHSRKKLIQQDKRKYNTPKYRLVVRFTNTQCICQIVTQQMAGDKVVEAAYGKELTHYGLPVGHKNYTAAYCTGLLLARRLLRKLGLDETYEGQTEVDGEDYHVEPAEEGPRPFRAYLDVGLARTSTGARVFGALKGACDGGLDIPHNEKRFAGYLTEEKKLDTELHQGYLLGRHVAEYAENLEEEEPEKYKRQFAKYFENNINPTELEDLIPEVHEKIRQNPERQTTRRPPPPPEKRKRWKQRKLTTEERKANLRAKLEALKEMAD*