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sw_12_scaffold_899_1

Organism: SW_12_Viridiplantae_56_8

partial RP 27 / 55 MC: 9 BSCG 13 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 2..454

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MYF2_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 139.0
  • Bit_score: 121
  • Evalue 9.70e-25
Small subunit ribosomal protein S1 {ECO:0000313|EMBL:JAC66878.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 139.0
  • Bit_score: 127
  • Evalue 1.90e-26
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 127.0
  • Bit_score: 113
  • Evalue 7.40e-23

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 453
GCCAAAGCAAAACAGTCTGGAAGCGAATTTTCCGTTGGCGACCTTGTGCACGGCAAGGTGGTCGCCATCAAGCCATATGGTGCGTTTGTTGACGCCGGCCAAATCGCTGGCCTGCTGCATCAGTCGCAGATCAGCGCTCAGCGCGTTCCCGACGTGACAAAGGTGTTCAGCGTTGGTGACGAGGTAAAATGCATTGTCATGAGCTACGATCCGGAAAAGAGCCGACTATCTCTTTCCACGCGCAAGCTCGAGTCCAGTCCAGGCGACATGCTGAATGACCCCGGTAAAGTGCAGGAGCAAGCCGAAGAGAAAGCAGCTGAATATAAGAAAATGCTGAGCAACATCGAGGCGCATACAAGCGGCCTGGACGATGAGCTGAACAGCTTGCTGCAAGCGGCGAGGCCGGAAGATAGCAATGGACAGCATGGAAATGACAACTCATCTAGTGATTGA
PROTEIN sequence
Length: 151
AKAKQSGSEFSVGDLVHGKVVAIKPYGAFVDAGQIAGLLHQSQISAQRVPDVTKVFSVGDEVKCIVMSYDPEKSRLSLSTRKLESSPGDMLNDPGKVQEQAEEKAAEYKKMLSNIEAHTSGLDDELNSLLQAARPEDSNGQHGNDNSSSD*