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SW_12_Viridiplantae_56_8

SW_12_Eukaryota_56_8

In projects: SW_12

Consensus taxonomy: Eukaryota

Taxonomy override: Eukaryote

Metagenomic Context

Parent: SW_12_UNK

Properties

Avg. coverage: 8.04 Longest contig: 32.24 Kbp Bin length: 2.93 Mbp GC content: 55.53 %

Contigs count: 847 Features count: 2769 rRNAs count: 0 tRNAs count: 6

Genome completeness

partial RP 27 / 55 MC: 9 BSCG 13 / 51 MC: 2 ASCG 13 / 38 MC: 3

Displaying items 601-650 of 847 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_12_scaffold_6289 Species: Micromonas pusilla (50%)	2	2384 bp	57.80	6.75	65.56
sw_12_scaffold_10480 Species: Tetraselmis sp. GSL018 (50%)	2	1665 bp	55.80	9.19	81.98
sw_12_scaffold_5137 Species: Tetraselmis sp. GSL018 (50%)	2	2708 bp	53.55	8.12	57.16
sw_12_scaffold_5368 Species: Selaginella moellendorffii (50%)	2	3915 bp	53.54	7.41	99.69
sw_12_scaffold_27383 Species: Monosiga brevicollis (50%)	2	1445 bp	57.65	7.47	85.95
sw_12_scaffold_3791 Species: Micromonas sp. RCC299 (50%)	2	3245 bp	57.26	8.01	43.64
sw_12_scaffold_16473 Species: Prunus persica (50%)	2	1170 bp	55.56	7.18	70.26
sw_12_scaffold_17164 Species: Ostreococcus 'lucimarinus' (50%)	2	1133 bp	55.43	8.47	99.29
sw_12_scaffold_15091 Species: Ostreococcus tauri (50%)	2	1256 bp	62.34	10.35	96.02
sw_12_scaffold_7445 Species: Setaria italica (50%)	2	2127 bp	53.97	9.64	89.84
sw_12_scaffold_12097 Species: Eucalyptus grandis (50%)	2	2344 bp	51.75	7.51	73.59
sw_12_scaffold_7446 Species: Bathycoccus prasinos (50%)	2	2127 bp	55.76	8.74	97.74
sw_12_scaffold_8599 Species: Physcomitrella patens (50%)	2	1918 bp	57.77	6.20	87.75
sw_12_scaffold_16937 Species: Phaseolus vulgaris (50%)	2	1146 bp	57.24	7.42	94.76
sw_12_scaffold_25076 Species: Erythranthe guttata (50%)	2	1472 bp	63.72	10.39	66.64
sw_12_scaffold_8140 Species: Coccomyxa subellipsoidea (50%)	2	1997 bp	50.98	7.71	55.58
sw_12_scaffold_6068 Species: Chlorella variabilis (50%)	2	2440 bp	52.01	9.67	88.77
sw_12_scaffold_8604 Species: Ectocarpus siliculosus (50%)	2	1917 bp	53.05	7.82	37.40
sw_12_scaffold_10260 Species: Physcomitrella patens (50%)	2	1690 bp	58.05	7.10	85.92
sw_12_scaffold_16712 Species: Brassica napus (50%)	2	1157 bp	54.80	6.91	84.53
sw_12_scaffold_18095 Species: Mantoniella squamata (50%)	2	1089 bp	60.42	6.61	100.28
sw_12_scaffold_19016 Species: Micromonas sp. RCC299 (100%)	2	1643 bp	55.93	6.57	103.35
sw_12_scaffold_7914 Species: Ostreococcus tauri (50%)	2	2039 bp	55.71	5.20	89.60
sw_12_scaffold_11413 Species: Coccomyxa subellipsoidea (50%)	2	1560 bp	53.91	8.53	57.12
sw_12_scaffold_15562 Species: Ostreococcus tauri (50%)	2	1226 bp	52.37	7.75	74.88
sw_12_scaffold_6764 Species: Coccomyxa subellipsoidea (100%)	2	2273 bp	56.80	7.52	83.81
sw_12_scaffold_2512 Species: Genlisea aurea (50%)	2	6960 bp	55.23	7.54	94.66
sw_12_scaffold_9992 Species: Guillardia theta (50%)	2	1723 bp	55.72	8.07	95.59
sw_12_scaffold_10496 Species: Tetraselmis sp. GSL018 (50%)	2	1662 bp	58.30	6.92	80.69
sw_12_scaffold_19482 Species: Micromonas sp. RCC299 (50%)	2	1025 bp	53.37	7.02	50.34
sw_12_scaffold_5384 Species: Ostreococcus tauri (50%)	2	2635 bp	55.48	7.25	97.69
sw_12_scaffold_13493 Species: Ostreococcus tauri (50%)	2	1367 bp	55.96	8.27	72.86
sw_12_scaffold_18331 Species: Micromonas sp. RCC299 (50%)	2	1078 bp	52.88	7.98	51.48
sw_12_scaffold_3805 Species: Coccomyxa subellipsoidea (50%)	2	3235 bp	55.05	7.64	88.56
sw_12_scaffold_9304 Species: Oryza brachyantha (50%)	2	1815 bp	54.21	6.61	80.17
sw_12_scaffold_4927 Species: Pythium ultimum (50%)	2	2782 bp	53.02	8.55	97.81
sw_12_scaffold_9305 Species: Ostreococcus 'lucimarinus' (50%)	2	1814 bp	57.88	7.22	91.79
sw_12_scaffold_7694 Species: Physcomitrella patens (50%)	2	2078 bp	49.42	7.17	51.40
sw_12_scaffold_8154 Species: Tetraselmis sp. GSL018 (100%)	2	2841 bp	54.88	7.74	80.04
sw_12_scaffold_10501 Species: Chlorella variabilis (50%)	2	1661 bp	55.39	8.31	88.14
sw_12_scaffold_7464 Species: Ostreococcus 'lucimarinus' (50%)	2	2125 bp	57.13	8.71	89.79
sw_12_scaffold_15572 Species: Tetraselmis sp. GSL018 (50%)	2	1225 bp	52.82	6.45	63.18
sw_12_scaffold_10273 Species: Setaria italica (50%)	2	3735 bp	53.47	7.07	62.57
sw_12_scaffold_6544 Species: Ostreococcus tauri (50%)	2	2320 bp	59.35	7.93	75.78
sw_12_scaffold_8619 Species: Selaginella moellendorffii (50%)	2	3639 bp	52.98	8.11	101.48
sw_12_scaffold_14885 Species: Monoraphidium neglectum (50%)	2	1268 bp	52.21	8.04	56.07
sw_12_scaffold_4933 Species: Solanum lycopersicum (50%)	2	3769 bp	57.89	7.35	88.75
sw_12_scaffold_19494 Species: Micromonas sp. RCC299 (50%)	2	1024 bp	58.79	7.23	83.20
sw_12_scaffold_4703 Species: Picea sitchensis (50%)	2	2860 bp	52.41	8.78	71.12
sw_12_scaffold_19956 Species: Micromonas sp. RCC299 (50%)	2	1006 bp	55.27	6.36	82.31

Displaying items 601-650 of 847 in total

SW_12_Viridiplantae_56_8

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SW_12_Viridiplantae_56_8

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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