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sw_4_scaffold_12153_1

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(2..571)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FLR7_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 187.0
  • Bit_score: 101
  • Evalue 7.70e-19
Putative RNA-binding protein {ECO:0000313|EMBL:EOD60468.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycin similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 187.0
  • Bit_score: 101
  • Evalue 1.10e-18

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Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GTGGCTTCCGACCCCGAGGTCGGCGGGCGTGACCGTGTACTCGGTGACCGAGTCGCCGTCGACCTCGGCGACGGTCGACTCCCCGTGGACGCCGAACTCGTCGAGGCCCGCGCCGTGGACGACCAGCGCGCGCTCGACGGACATCCGCGAGAGCGCCGCCGCCAGCATCGGCACGAGGTCGGGGTCGTACACGCCGACCACCTGCGCGTCGGCGCCGGCGGGGTTCGTCAGCGGCCCGAGCACGTTGAAGATGGTCCGCATCCCGAGCTCCTTCCGGGGGCCGATGACGGCCTCCATCGCCGGGTGGAAGACGGGTGCGAGCATGAACCCCATTCCCCGTTCCTCGATGCAGGCCTCGACGGCCGGCGGTTCGGCGTCGATGGTGACGCCGAGTTCCTCGAGAACGTCCGCGCTCCCCGACGACGACGACACCGAGTAGTTGCCGTGCTTGGCGACCGGGACGCCGGCGCCCGCCACGACGAACGAACTGGTCGTCGAGACGTTGATGGTGTCGTGGCCGTCGCCGCCGGTGCCGCAGGTGTCGACCAGCGGCGCCCGGTCGGGGTCGAT
PROTEIN sequence
Length: 190
VASDPEVGGRDRVLGDRVAVDLGDGRLPVDAELVEARAVDDQRALDGHPRERRRQHRHEVGVVHADHLRVGAGGVRQRPEHVEDGPHPELLPGADDGLHRRVEDGCEHEPHSPFLDAGLDGRRFGVDGDAEFLENVRAPRRRRHRVVAVLGDRDAGARHDERTGRRDVDGVVAVAAGAAGVDQRRPVGVD