ggKbase home page

sw_4_scaffold_14572_1

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 1..336

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPK1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 109.0
  • Bit_score: 208
  • Evalue 4.50e-51
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 109.0
  • Bit_score: 208
  • Evalue 6.30e-51
transcription factor TFIIE subunit alpha similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 113.0
  • Bit_score: 196
  • Evalue 2.90e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 336
TACCGGCGCCTGCGCGACGAGGACTCGGGGTGGCTGACCTACCTCTGGACCTTCGAGTACGAGAAGATCCCCGAACAGCTGGAGTCGGAGATGCACCGCCTGCTCGACGCGCTGGAGGACCGCTCGGAGTACGAACACGACCACGAGTTCTACCTGTGTGAGCACTGCGGGATCCGCTTCGAGTTCGGCGAGGCCATGGAGTTCGGCTTCGAATGCCCCGAGTGTGGCAACCCCGTCGAGGCGATGGAGAACACCCGCCTCGTCGAGGCGATGGACGAGCGCATCGCGGCCCTGCGGGACGAACTGAACGTCGACCGCGCCGAAGCCGAGGTCTGA
PROTEIN sequence
Length: 112
YRRLRDEDSGWLTYLWTFEYEKIPEQLESEMHRLLDALEDRSEYEHDHEFYLCEHCGIRFEFGEAMEFGFECPECGNPVEAMENTRLVEAMDERIAALRDELNVDRAEAEV*