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sw_4_scaffold_17098_1

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 153..1004

Top 3 Functional Annotations

Value Algorithm Source
Transposable element Tc1 transposase n=1 Tax=Lithobates catesbeiana RepID=C1C4F2_LITCT similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 277.0
  • Bit_score: 154
  • Evalue 1.50e-34
Uncharacterized protein {ECO:0000313|EMBL:ETN97406.1}; TaxID=46433 species="Eukaryota; Rhizaria; Foraminifera; Monothalamids; Reticulomyxidae; Reticulomyxa.;" source="Reticulomyxa filosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 280.0
  • Bit_score: 158
  • Evalue 1.40e-35
similar to transposase-like similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 282.0
  • Bit_score: 143
  • Evalue 8.30e-32

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Taxonomy

Reticulomyxa filosa → Reticulomyxa → Eukaryota

Sequences

DNA sequence
Length: 852
GTGCATGATGCACACAGAAGTGGAAGGAAAAGAGCGACCACGTCTGATACAGACGATGAGATTGTCAAACTAGCGAAGACATATCGAAAAACTGGTTCATCAGACATTCAACAACAGCTATCAGAAGATAATATTGAACTCTCATATACAACAATACAAAGGAGACTAAAAGAAAGTGGTGCTATATATGGTATACCGGCACAGAAACCAGCATTGAGTGAAACAAATCATCTGAATAGAATACAATGGGCACAGCAACACAAAAACTTTTCATGGGATCACGTTATATTTTCAGATGAGAAAATTTTTGCTCTGGGTGAGGATAGTGGTAAGGTGTGGATAATGAATGGTGAAAATTATTACCGTAGTACAAGGAAAAATAGGTCGAAGGTAAACATTTGGGGAGCTATATCCTCAACAGGAAGGAGTGAATTACATTTCATCAATACTAGACATACTGCTGAAACCTATCAGAATATCCTCCTAACAACATTTATGAAATTTTATCATCAATGTTGTTATGAGGGTGTCTGGTATTTCCAGCAGGATGGTGCCCCACAACACACAGCAGGTAGTACAAAAGAACTTTTAAACAACAAGTGCATCAAAACAATCGAATGCCCAGCCCAAAATCCAGATTTTAATCCTATTGAAAATCTTTGGGCGTTTTTACAACGAAGAGTTGAGGATGAACGTCCTCAAAATAAGAAAGAATTGACCAACGTAGTTAAGCGTGAATGGGAAAACGTTAGACATACATCCATAAAAAACTTGATTATGTCGATGCCAAAAAGAATTAATGAGGCTATTGAAAAAAAATGGAAATCATACCCATTATTAAACAGTGATTAA
PROTEIN sequence
Length: 284
VHDAHRSGRKRATTSDTDDEIVKLAKTYRKTGSSDIQQQLSEDNIELSYTTIQRRLKESGAIYGIPAQKPALSETNHLNRIQWAQQHKNFSWDHVIFSDEKIFALGEDSGKVWIMNGENYYRSTRKNRSKVNIWGAISSTGRSELHFINTRHTAETYQNILLTTFMKFYHQCCYEGVWYFQQDGAPQHTAGSTKELLNNKCIKTIECPAQNPDFNPIENLWAFLQRRVEDERPQNKKELTNVVKREWENVRHTSIKNLIMSMPKRINEAIEKKWKSYPLLNSD*