ggKbase home page

sw_4_scaffold_18195_1

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 88..963

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3X1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 291.0
  • Bit_score: 364
  • Evalue 9.80e-98
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 291.0
  • Bit_score: 364
  • Evalue 1.40e-97
transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 287.0
  • Bit_score: 361
  • Evalue 2.30e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 876
ATGAGTCGTGCAGAGGGCGGCTGTCCGGAGTGCAGTGGCAGGCTACGAGCGACCGACGGCGAGACGGTGTGTGTCTCGTGTGGGCTGGTCGTCGCGGAGGACCGCGTCGACCGCGGACCGGAGTGGCGCGTCTTCGACGCCGACGACCGCGACCGGATACGCACGGGCGCCCCGCGGGACCGCTCCCGACACGACCGCGGGCTCTCGACGGAGATCGGCCGCGGTGACCGGGGTGCCTCGGGCCGAAAGCGCCGTCGACTCGCCCGTCTCCGCCGCCAGCACGACCGCACGAAGATCTCCTCCAAGGCCGAGCGCAACCAGGTGTACGGCTTCACGGAGATACGCCGCGTCGTCTCCAATCTCGACCTGCCACGCGGCGTTCGGGACGGCGCCTGCCGGCTGTTCGAGTCCGCACAGGACGCCGACCTGCTGCGGGGGCGGTCGATCGAGGGGTTCGCCGCCGCGGCCGTCTACGCCACCTGTCGCACCCGTGGCGGCGGCACCGTCCGCACCGAGCGGGAGGTCTGCGAACACGCCCGCGCCGACGTCGAGGAGCTGCGCCCGGCGTACGACGCCCTCAACCGCGAACTCGGACTCCCGACGGGACCGATCGACCCCCGCGAGTATCTCGCCCGCTTCGCCTGTGCTCTCGACCTGCCTGGTCGCGTGGAGTCACACGCCCGCGAGATCGCCGCCGAGGTCCACGAGAACGGTCTCGCCGGCGGCCGTGACCCGACCGGCGTCGCCGGCGCCTGTCTGTACGCCGCCGCCGACGACTGCGACGTCGCCCTCACGCAGGCGGAGGCTGCCGAGGCCGCCGACGTCTCCCCCGTCACGCTCCGTGGCGCCTACTACGCCCTGCCGGTGCACGACTAA
PROTEIN sequence
Length: 292
MSRAEGGCPECSGRLRATDGETVCVSCGLVVAEDRVDRGPEWRVFDADDRDRIRTGAPRDRSRHDRGLSTEIGRGDRGASGRKRRRLARLRRQHDRTKISSKAERNQVYGFTEIRRVVSNLDLPRGVRDGACRLFESAQDADLLRGRSIEGFAAAAVYATCRTRGGGTVRTEREVCEHARADVEELRPAYDALNRELGLPTGPIDPREYLARFACALDLPGRVESHAREIAAEVHENGLAGGRDPTGVAGACLYAAADDCDVALTQAEAAEAADVSPVTLRGAYYALPVHD*