ggKbase home page

sw_4_scaffold_1846_5

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(2564..5077)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C large subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMD6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 352.0
  • Bit_score: 660
  • Evalue 2.50e-186
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 352.0
  • Bit_score: 660
  • Evalue 3.50e-186
replication factor C large subunit similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 351.0
  • Bit_score: 569
  • Evalue 1.20e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2514
ATGGATTGGACCGAGAAGTATCGTCCGTCGACGCTCTCGGAGGTCCGAGGCAACGACAAGGCCAGGGACGCACTCGCGGAGTGGGCCGAGACGTGGGACGCAGATGGGGAGGCGGTGATCCTCCACGGCGCGCCGGGCGTCGGCAAGACCTCGGCGGCCCACGCGCTCGCGGCCGACATGGGCTGGCCGACGATCGAGCTCAACGCCTCCGACCAGCGCACGAAGGCGGTCGTCGAGCGGGTCGCGGGCGAGGCCGCGAAATCGGGGACGCTCACCGGCGGGAGCGTGGGCCGACGGCTGGTGATCATGGACGAGGCCGACAACCTTCACGGGAACGTCGACCGTGGCGGCTCGCGCGCGATCACGAGCCTCGTGAAGGAGGCGGGCCAGCCGATGGTGCTCATCGCGAACGAGTTCTACGACATGTCGAACTCCCTGCGGAACGCGTGCGAAACCATCGAGTTCCGGGACGTCTCGGCGCGCTCGATCCTGCCCGTGCTCCGGGACATCTCCCGGCGGGAGGACGTCGAGTACGAGCCCGAAGCCCTGGAGGCGATCGCCGAGTCGAACAGCGGCGACCTCCGGGGCGCGGTCAACGACCTCCAGGCGCTCGCCGAATCCACGGAAACACTCACCGCCGAGGCCGTGGTCACCGGCGACCGCGATCGGACCACCGGGATCTTCGACTTCCTCGATGCCCTCATCAAGGAGGCGGACGCGGAGGGCGCGCTGCGGGCCTCCTACGACGTCGACGAGACCCCCGACGACCTCATCAACTGGATCGAGGACAACGTCCCGAAGGACTTCCAGGGAGCGGAACTCGCCGACGCCTACGACAGCCTCGCGAACGCGGATCGATGGCTCGGGCGGGTGCGGGCCACTCAGGACTACTCCTACTGGCGCTACGCCGGCGACGCCATGACCGCGGGCGTCGCGGCCGCGCGGCGCGAATCCAAGAGCGGCTGGACCCGGTACGGCCCGCCGAGCTACTGGTCGAAGCTCGGACGTTCGCGGGGCACGCGCGACAAGCGCGATTACGTCGCCCAGCACATCGCCGCACCACTGCAAGAACCGGGAGCTGACCGTCGCCATGGCCGCCCGCTACGACCTCGACACGGAGCACGTCGCCTTCGTGACCGGCTCCGGCGAGGACACCAACAAGGTCCAGGGGATCGTCGCGGATGCCGCGGAGCTGCGCGACGAGGAGGCGGTCTCGCACGCCGAGGGCGCGTTCGAGGGGGCGACACGAACCACCGAGGAACCCGAAACGGGCGACGGTTCGGACGACGAGGCGAACGCCGATCCGACCGATACGGAAGGGGAGGGCGACCAACATCAGGACGCTGGCGACGACTCCGCAGCCGACGACTCCCAGTCCGGTCTCGGGGACTTCTGCTGAACCGGCCCGCGACGGTCGGCGACGTTTTTCACCGTCCGGGACGAACGCCGCGCATGCGCGCCGCAGTTCTCGAAGCGTACGGCGAACCGCTCGACGTGACCGAGGTCGCGCCGCCCGACGTCGAGAGCCACGGAGCCGTGGTCGCGGTCGAGGCCTGCGGCATCTGCCGGAGCGACTGGCACGCGTGGCAGGGCCACGGCGAGTGGGCCGACGACAGGGTGCCCCGCGGGCAGATCCTCGGCCACGAGCCCGTCGGTCGGATCGTCGCGACCGGCGAGCACGTCACCGCCTTCGAGGGTGGCGAGCGCGTCGCGATCCCGTTCAATCTCGGATGTGGCGTCTGCGAGGAGTGTGTGACCGGTCACGGGAACGTCTGTCCCGACGACCGCGCGCTCGGGTTCGAGCCCGACGCGCCGGGCGCGTTCGCCGAGCGGGTCCACGTCCCCCATGCCGCATACAACCTCACGGAACTCGGAGCGGGTGTCGCGCCGGTCGACGCGGCGGCGCTCGGCTGTCGGTACGTCACGGCGTTCAACGCGCTCGTCCGCCGTGCCGACGTCGCGGCCGGCGAGTGGGTCGCGGTGTTCGGCTGCGGCGGCGTCGGTCTCTCGACCGTCCAGATCGCGAGTGCGCTCGGTGCACGGGTCGTGGCGGTCGACGTCGACGACGCGACCCTCGATCTCGCGAGCGAGATCGGTGCGACCGAGACGGTCGACGGGGCACGGACCGACGACGTGCCGGGAGCGATCGCGGCGCTCACCGACGGCGGTGCGCACGTCACGATGGACGCGCTCGGGCGCCAGGAGACGTGTCGCGACGCGGCCGAGAGCCTCCGGCGGCGCGGTCGTCACCTCCAGGTCGGGCTCACGACCGACGCCGAGCGCGGCGAGATCGCGCTGCCGACCGACGCGATCGCCCGGGGGGAGATCGACTTCCTGGGGGTGCGCGGGCTGTCGCCGACGGGCTACGACGAGGTGCTTCGCCTCGTCGAGACCGGCGTGCTCGATCCCGGCCGCCTCGTCACCCGCGAGGTCGGGCTCGACGAGGTTTCGGATCGGCTCGCGGCGATGAGCGAGTACCGAACGCGGGGGATCGAGGTCGTCACCGGGCTGTAG
PROTEIN sequence
Length: 838
MDWTEKYRPSTLSEVRGNDKARDALAEWAETWDADGEAVILHGAPGVGKTSAAHALAADMGWPTIELNASDQRTKAVVERVAGEAAKSGTLTGGSVGRRLVIMDEADNLHGNVDRGGSRAITSLVKEAGQPMVLIANEFYDMSNSLRNACETIEFRDVSARSILPVLRDISRREDVEYEPEALEAIAESNSGDLRGAVNDLQALAESTETLTAEAVVTGDRDRTTGIFDFLDALIKEADAEGALRASYDVDETPDDLINWIEDNVPKDFQGAELADAYDSLANADRWLGRVRATQDYSYWRYAGDAMTAGVAAARRESKSGWTRYGPPSYWSKLGRSRGTRDKRDYVAQHIAAPLQEPGADRRHGRPLRPRHGARRLRDRLRRGHQQGPGDRRGCRGAARRGGGLARRGRVRGGDTNHRGTRNGRRFGRRGERRSDRYGRGGRPTSGRWRRLRSRRLPVRSRGLLLNRPATVGDVFHRPGRTPRMRAAVLEAYGEPLDVTEVAPPDVESHGAVVAVEACGICRSDWHAWQGHGEWADDRVPRGQILGHEPVGRIVATGEHVTAFEGGERVAIPFNLGCGVCEECVTGHGNVCPDDRALGFEPDAPGAFAERVHVPHAAYNLTELGAGVAPVDAAALGCRYVTAFNALVRRADVAAGEWVAVFGCGGVGLSTVQIASALGARVVAVDVDDATLDLASEIGATETVDGARTDDVPGAIAALTDGGAHVTMDALGRQETCRDAAESLRRRGRHLQVGLTTDAERGEIALPTDAIARGEIDFLGVRGLSPTGYDEVLRLVETGVLDPGRLVTREVGLDEVSDRLAAMSEYRTRGIEVVTGL*