ggKbase home page

sw_4_scaffold_2011_2

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 881..3226

Top 3 Functional Annotations

Value Algorithm Source
Ubiquitin-protein ligase, cullin 4 n=1 Tax=Selaginella moellendorffii RepID=D8SLC9_SELML similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 802.0
  • Bit_score: 637
  • Evalue 1.60e-179
CUL4-2; ubiquitin-protein ligase, cullin 4; K10609 cullin 4 similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 802.0
  • Bit_score: 637
  • Evalue 5.00e-180
Ubiquitin-protein ligase, cullin 4 {ECO:0000313|EMBL:EFJ14633.1}; TaxID=88036 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 802.0
  • Bit_score: 637
  • Evalue 2.20e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Selaginella moellendorffii → Selaginella → Selaginellales → Lycopodiidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2346
ATGGCAGCATCGCCGGCCGCGGCGGTGTCGTCGGCGCAAAGCGCGCAGAGCGCGCAGAAGAAGGCATCGATCAAGCCATTCAAGGGTGCGTGCTTGCACATGGACGCCCACAGGCGCAGCTCGCGTGCGCGGAGGGAATTGAACGCGGATGAGGCTGGCGTGATGTGCACAGCGAAGCCGAGTGTGCCGGAGAACTTCGAAGAGGCCACATGGTCCAAGCTCGCATCCGCGGTAAGCGCGATCCAGCAGCGCCAAGCGGTGGCGCACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGCCAGCAACATCGTCGCTGACCTCTCTTCACAGCTCCGACGCACTGGCAGCCAGCTTGAACTTCTCCACTCCGCCGCTTCCCGCTGGTCTGACTTCTGTTACCAGCTCAAGCTCATCAAGCTCCTTTTCCAGTACCTCGACCGTGCCTTCGTCCTCCAACAGCAAACCTCCGTCTCCAAGCAGCACGCCGCCAATACCTCCTCCGACTCCTCTGCTCTCCATCCACTCTGGGACCTTGGCGTCCGCGTCTTCGGCCAGCACCTCCGCCGCGCCTCCGACGTGGAGAACGCCGTTGTGCAGGGCGTCATCGCTCTCTCGCGGAAGGAGCGCGCCGGTGAGGAGGGTAACATGCAGCTCAGCCAGACGCTCTGCAGCATGCTCATCTCCCTCGACGCCTACTCTTCCGTCCTTGAACCTCCATTCGTGCAAGAAGCTTATGACTGGTATGAGCAGGAGGGCGACCGCCTCCTTCAAGCCACCGATGTGCCCGAGTATCTTGTGCACTGCGACGAGCGCATTGCGCAAGAGGTCCAGCGCTGCGACACCTATCTTACACAAAGCACTAAGAGCCAGCTGACGCGGCAAGTTGAGCAGCAACTTGTTTCACGGCACGTGGACACCATCTTGGCCAAGGGCTTCAACGCACTGTGCGAACAGCACCGGGTTCCCGACCTCGCTCGGCTCTACTCGTTGCTCGGGCGCGTCAAAGCACATGATAAGCTTCGCCACGCTTTTGTCGAATACGTCAAAAGCGCCGGCGAGGCGTTAGTCGCGGACGCGTCAGACCCACGAGCTCAAGCGCACGATAAGAATGATTCGTCCTCTACCTACAAGATTGCTAAAGATGTTGTACCAAACCTACTACAACTGAAACAACGCTTAGAGGTGATCTTGAAGGAGTCGTTCCGATCAGACGACCGGTTCTCCCGTGCACTTCGTGAGGCATTTGAACATGTGCTCAATAAGCGAACCAGCAGGCCAGCAGAACTCGTCGCCAAATATGTGGACAGCAGACTTCGACCAGGTAACACTGGCCTGACAGAGGCCGATTTGGAAAGCGAGCTTGACCAGGTGCTTGTCCTTTTCCGACATATCGAGGGCAAGGACGTCTTCGAAGCATTTTACAAGAAAGACCTTGCCAAGCGCCTGCTCATGAACAAGTCTGCTAGCGTTGATGCAGAGAAGAGCATGATTAGCAAGATAAAGGCTGAGTGTGGCTCTCAATTCACAACCAAGCTGGAGGGGATGTTTAAAGACGTCGATTTATCAAAAGAGATCAGCTCAAGCTTCAAGTCGAACACGTCTCAAAGTTCTCTTCAAGGAGTGGATCCGTCGGTAACAGTGCTCACCGCTGGCTTTTGGCCGTCGTACCCGCAACTCCATATGAATCTGCCTGAGGAAATCAAGGTATGCCAAGATGCCTTCACTGATTTCTACCTGAGCAAGCACAGCGGTAGGCGGCTTCAGTGGCAGCACGTGCTTGGGCACTGCACGCTCCGAGCCCGTTTCAACTCTGGAAACAAAGAGCTGGTCACGTCATTGCTGCAAGCATGCGTGCTTATGAAGTTCAACGATGCCGATGAGCTCACGCTTGAGCAGCTCCAAGATGAGCTTAACGTCGATGGTAAGGAGCTTCGACGGAATCTGCACGCCCTTGCCTGCTCTGGTAAGGCGAAAGTGCTAAAGAAAGAGCCAGAGAACAAAGAAGTCAGCGCTGGCGACACCTTCAAATTCAATGCATCCTTTAGCGAGAAGTTGTACAGGATTAAGCTGAACACGATGCAGTTGCGGGAGACGCCTGAGGAACAGGCGCAGACAAACGAGCGTGTTAATCAGGACCGTCAGCACCAGATCGACGCCGCGGCAGTGCGCGTGATGAAGACAAGGAAAAAGCTGTCGCATCAGCTGCTTGTGAGCGAGGGTCTTAAGCAACTGCGCTTCAGCGCTCGCTCGACCGACGTAAAGAAGCGCATTGAGTCTCTGATTGAGCGCGAGTACCTTGAGCGCGATCCCCATGACCACCAGAGCTACAGATATCTTGCATAA
PROTEIN sequence
Length: 782
MAASPAAAVSSAQSAQSAQKKASIKPFKGACLHMDAHRRSSRARRELNADEAGVMCTAKPSVPENFEEATWSKLASAVSAIQQRQAVAHXXXXXXXXXXHASNIVADLSSQLRRTGSQLELLHSAASRWSDFCYQLKLIKLLFQYLDRAFVLQQQTSVSKQHAANTSSDSSALHPLWDLGVRVFGQHLRRASDVENAVVQGVIALSRKERAGEEGNMQLSQTLCSMLISLDAYSSVLEPPFVQEAYDWYEQEGDRLLQATDVPEYLVHCDERIAQEVQRCDTYLTQSTKSQLTRQVEQQLVSRHVDTILAKGFNALCEQHRVPDLARLYSLLGRVKAHDKLRHAFVEYVKSAGEALVADASDPRAQAHDKNDSSSTYKIAKDVVPNLLQLKQRLEVILKESFRSDDRFSRALREAFEHVLNKRTSRPAELVAKYVDSRLRPGNTGLTEADLESELDQVLVLFRHIEGKDVFEAFYKKDLAKRLLMNKSASVDAEKSMISKIKAECGSQFTTKLEGMFKDVDLSKEISSSFKSNTSQSSLQGVDPSVTVLTAGFWPSYPQLHMNLPEEIKVCQDAFTDFYLSKHSGRRLQWQHVLGHCTLRARFNSGNKELVTSLLQACVLMKFNDADELTLEQLQDELNVDGKELRRNLHALACSGKAKVLKKEPENKEVSAGDTFKFNASFSEKLYRIKLNTMQLRETPEEQAQTNERVNQDRQHQIDAAAVRVMKTRKKLSHQLLVSEGLKQLRFSARSTDVKKRIESLIEREYLERDPHDHQSYRYLA*