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sw_4_scaffold_337_18

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(23739..24170)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system effector n=1 Tax=Pseudoalteromonas piscicida JCM 20779 RepID=U1KEQ9_PSEO7 similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 115.0
  • Bit_score: 120
  • Evalue 1.20e-24
Hcp family type VI secretion system effector {ECO:0000313|EMBL:KKE81858.1}; TaxID=1129367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalterom similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 115.0
  • Bit_score: 120
  • Evalue 1.70e-24
type VI secretion system effector similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 120.0
  • Bit_score: 118
  • Evalue 1.30e-24

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Taxonomy

Pseudoalteromonas luteoviolacea → Pseudoalteromonas → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGCCTCAGCCTATCACTGCCACGTTTAAGGACAGCGGCGGAAACAAAATCAAAGGAGGCGTCCAGGTCGCCGGGCGCGAGGAGGATGTTGATGTGCTTGAGTTCGACCACTCAATCAACATTCCGGTCGATACCCAGAAGGGAGAACTCCAGGGCATCCGCGAGCATGAGGCGGCGACGCTTTGGAAGCCGGTCGACCGCGCCACGCCCATGCTGTACAAAGCCCTTACGAACGGCGAGACGTTGAAGGAAATCGTATTCCACTGGTATCACATCGACAAGTCGGGAACAGAGACGGAATACTTTACCCTCACGCTGGAGAATGCGAAGATTGCGGATATGACAACCGTATCGCCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATGCTTCTGCGGGCGTTTGTAGCTGCAAAATAG
PROTEIN sequence
Length: 144
MPQPITATFKDSGGNKIKGGVQVAGREEDVDVLEFDHSINIPVDTQKGELQGIREHEAATLWKPVDRATPMLYKALTNGETLKEIVFHWYHIDKSGTETEYFTLTLENAKIADMTTVSPXXXXXXXXXXXXXLMLLRAFVAAK*