ggKbase home page

sw_4_scaffold_5468_2

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(2020..4662)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LKQ9_PICSI similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 846.0
  • Bit_score: 430
  • Evalue 5.70e-117
Putative uncharacterized protein {ECO:0000313|EMBL:ABR16239.1}; TaxID=3332 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Pinales; Pinaceae; Picea. similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 846.0
  • Bit_score: 430
  • Evalue 8.00e-117
E3 ubiquitin-protein ligase UPL6-like similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 827.0
  • Bit_score: 416
  • Evalue 2.70e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Picea sitchensis → Picea → Pinales → Pinidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2643
CGCTCCATTCGCTTACGCAAACTCGCTTTACTCTCATTGCGTGTGCTTTCCAGAGAGCCAAAGCTATCCACCACTCAGCTCTTCGACACCCTTGTCTCAGAGCACTGCCCGCTCGTATGCACCTGGCTTCTACGCAACGGCGCTCTGCCCGCGATTTCGCACACCATGTATCACGCTCCAACCGATGCACAATCCAATACTTCTGCTGTCCGAGCGGCTGTACAGTCGCTGCTCAAGCATGTTGTCCCGTTCAGTGATCGCACTTCTAGCAGCCTCGCGGCTCACCTGCTCGCCCATCCGATGATGCTCTCATCTTTTTACGACGAGCTTCATTCTTTGCGCTTGGATGCAGTCCTCTGCGCGCTTTCAGAACTGTACTCGCAAGCAGGGGGGGTCGATGCTGTGGAGTATCAGCTCATCTCTACGCATGGTCAGTGGGCACCTGCACGCCTCATTTGCTCAGCTCTTGAAGTGCTGAATGTGCATGACTGCTCTGAAAGCTTGCCGTCATGCACAGGCAAGTCGGCCGTATCACAATCAGACATTGCCCACGCAACCAAGTTGCTCTGCCTACTCTGCACTAGGCTTTTGTGGCGCCTACCACATGGCACATTTGAGACTGATGGCAAGCTTGTAGACCCTGAGGATCTTGAACAAGGTGATAAAAATCTTAAACAAGGTGATCTCACTAGTAGTATCGCGCCACAAAATGCAAGCCCGCCGCCCCACGACGATCGTGCACTGAGATCGCATCTTCCTCTGCTGCAATCGCATGATGTACTTCGCCAGCTACTGACTTTCGGCATACTCGCTCCGACAAAGGCTCCATTTGACAGCTCGGATGCAGAAAAAAGCAGTGGCCCCGCCGCCTTCGTTGCCGCATGTGAGCATGTGCTGACTGTGTTCCTCAGGCAGAGTCAGGACGATAGAGGGAAGCTGATGTTCAATCTGAGCTTCTCGAACAACTTGCCACAGCGGATGTGGCGCGCTACACGCGAGCTTCATGACGGTTCGCGCTGGCCTGAGCGCCTGCCGCACCATGAACAACCATGGATCTCTGTCATGGGCGTGTTTGCACCGATCATGAGCTTCGTAATGCTTTCCGCCGACGACGTAGACTTCTTCGAGCACAAGCACCCTGTGCAGCCGGAGGAGTGCGCGCTCATGGTTGATACTCTGCGAGCGGCACTTTGGCAGCTCGCGTGGGTTGATCCGGGGAATGGCGTGAGACTTAATTCGTCCACGCGCTTAGCAGCGGCTGCTGGCATTCAGAATCTGCTGGCACACCTGAATACGAGAAATAGCCGTCGACCATTCATGGATGGGTTTCATTTTATCGCAAACGAGCTTATGCCATGCATCAGCGGACCACGGGCGGCGCAATTCGTTTCGGATGCGTGCGAAGAAGGCAAGCGCGCGAACGAGCTGTTGACCCGTGGACCTTCACTTGTGCCGTTTACGCTTCGAGTGAAAGCGCTACAGGAATTCATTCGGCAGGATAAGCTTCGAATGGGTCGGAGTGCTGGCCTAGATGCTATGGGCGGTGGAACGCTGGTCCATGTGCGACGCGACAATCTCGTTCATGATGCTTTCTCCGAGCTGTACACGCATGACCCTCACGTGCTCAAAGGCAGCCTGAAGATAGAATTCGTGGACGAGTTCGGTCTTCAGGAGGCTGGCATTGATGGTGGCGGCTTGCTCAAAGATTTCATTGAAAGCCTTTGCAGAGAGATTTCCCTGAATCCGCCACTCGGAATCTTCAGGGAGACAGCTGATCACAAGCTCTATCCAAATCCGGCCGCGAGCGACACGAACGGCAAAAAGCTCGTTCTCTTCGAGTTTGTTGGCATTGTGCTTGGGAAAGCCCTGTATGAAGGGATCCTTACAGAGCTTCCGCTGGCGCACTTCTTCTTGAGCAAGCTGAAGGGAAAATCAAATGGCTTCAACGACCTTCACAGTCTCGATGAAGAACTCTGGCGCTCTTTAGCGTACCTTAAACGATATAATGGCGATGTGGGTGAGCTCGGGCTTACATTCACAGTCAATTCGGAATCCGAGGGCAGAGAGGTTGGACTTGTGAAGGATGGCAAGCAAATCCCGGTGACGTCAGCAAACAATACTCGCTATGTGGAACTTGTCGCGCGATACAAGCTGAATGATGAGATTGCTAGTCAGTCTGAGGCATTCTTGCGTGGCTTTCAACGACTGATGAATCGTGAGTGGCTGTTGATGTTCAACGAAAATGAGCTTCAGGCGCTGATAAGTGGAAAGCGCCATGAGGGCTTCGATGTGGATGATTTGCAGGCCAACAGTGTCTTCTCGGGTGGCTTTTCAGCCGATGATCGGTGTGTCAAAGATTTCTTTGCAACACTGCGGTCACTCTCGGCGGAGGAGCAGCGGAAGTTCTTGCGCTTCTGCACTGCATGCCCAAATCCACCTTTGCTCGGTTTCAAGGAGCTGCAGCCTCCATTCACGATACACAGAGCTGCAAGCGGTCAAGGCGAGAGTGCGGACAACGAGCGCCTTCCATCATCAACCACATGCAGCAATATTCTGAAGCTACCACCTTATTCAAGCCAGGCAACGATGCGAGAGAAGCTGCTTCGAGCAATCCAGGATGCCAGCGGCTTCCACCTCTCGTGA
PROTEIN sequence
Length: 881
RSIRLRKLALLSLRVLSREPKLSTTQLFDTLVSEHCPLVCTWLLRNGALPAISHTMYHAPTDAQSNTSAVRAAVQSLLKHVVPFSDRTSSSLAAHLLAHPMMLSSFYDELHSLRLDAVLCALSELYSQAGGVDAVEYQLISTHGQWAPARLICSALEVLNVHDCSESLPSCTGKSAVSQSDIAHATKLLCLLCTRLLWRLPHGTFETDGKLVDPEDLEQGDKNLKQGDLTSSIAPQNASPPPHDDRALRSHLPLLQSHDVLRQLLTFGILAPTKAPFDSSDAEKSSGPAAFVAACEHVLTVFLRQSQDDRGKLMFNLSFSNNLPQRMWRATRELHDGSRWPERLPHHEQPWISVMGVFAPIMSFVMLSADDVDFFEHKHPVQPEECALMVDTLRAALWQLAWVDPGNGVRLNSSTRLAAAAGIQNLLAHLNTRNSRRPFMDGFHFIANELMPCISGPRAAQFVSDACEEGKRANELLTRGPSLVPFTLRVKALQEFIRQDKLRMGRSAGLDAMGGGTLVHVRRDNLVHDAFSELYTHDPHVLKGSLKIEFVDEFGLQEAGIDGGGLLKDFIESLCREISLNPPLGIFRETADHKLYPNPAASDTNGKKLVLFEFVGIVLGKALYEGILTELPLAHFFLSKLKGKSNGFNDLHSLDEELWRSLAYLKRYNGDVGELGLTFTVNSESEGREVGLVKDGKQIPVTSANNTRYVELVARYKLNDEIASQSEAFLRGFQRLMNREWLLMFNENELQALISGKRHEGFDVDDLQANSVFSGGFSADDRCVKDFFATLRSLSAEEQRKFLRFCTACPNPPLLGFKELQPPFTIHRAASGQGESADNERLPSSTTCSNILKLPPYSSQATMREKLLRAIQDASGFHLS*