ggKbase home page

sw_4_scaffold_6612_2

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(2213..2632)

Top 3 Functional Annotations

Value Algorithm Source
Histone H2A n=1 Tax=Lycium barbarum RepID=G5DDX7_LYCBA similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 137.0
  • Bit_score: 195
  • Evalue 3.80e-47
Histone H2A {ECO:0000256|RuleBase:RU000527}; TaxID=112863 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapet similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 137.0
  • Bit_score: 195
  • Evalue 5.30e-47
probable histone H2AXa-like similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 135.0
  • Bit_score: 194
  • Evalue 2.60e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lycium barbarum → Lycium → Solanales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 420
ATGAGCGGCAGGGGCAAGAGCGGCGGGAAAGAGCAGGCGAAGAAGCAGATTTCACGCTCTCAGAAGGCAGGCTTGCAGTTTCCAGTCGGGCGCCTTGCGCGCCACTTGAAGGAGGGCAAATACGCGCAGCGCATCGGCGCCGGCGCGCCTGTGTACACCGCCGCTGTGCTGGAGTACCTCGTCGCCGAGGTGCTCGAGCTCGCCGGCAACGCCGCACGTGACAACAAGAAAGCGCGCATCATTCCACGGCACATCCAGCTCGCCATCCGCAACGACGAGGAACTCTCCAAGCTTCTTGGCCACGTCACCGTCGTCCAGGGTGGCACCCTCCCGCACATCCACCAGTCCCTCCTACCTTCTTCCGCCTCGGGCCAGAAGCGCGACGCCACGAAGGCAATGCAGGAGTCTGCCGAGGAGTAA
PROTEIN sequence
Length: 140
MSGRGKSGGKEQAKKQISRSQKAGLQFPVGRLARHLKEGKYAQRIGAGAPVYTAAVLEYLVAEVLELAGNAARDNKKARIIPRHIQLAIRNDEELSKLLGHVTVVQGGTLPHIHQSLLPSSASGQKRDATKAMQESAEE*