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sw_4_scaffold_83_16

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(14108..15187)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7H6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 337.0
  • Bit_score: 577
  • Evalue 9.10e-162
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 337.0
  • Bit_score: 577
  • Evalue 1.30e-161
Transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 330.0
  • Bit_score: 557
  • Evalue 2.10e-156

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1080
TTGAAGTGTAGCGTTTCCCAGTACAGTCACCGCAACCACCCCGAGCACCCCCTCACAGTAGTCATCTTGGAAGGCAATACAACTCGCATCCAGACGCACGAATCAAGCGAACGAACCAACGAGCAATCACAAGAGCGCACCACCGATGCCGAGGAGAGCGAACGAGTCTGTCCCGAATGTGGCGGCCGTCTCGTGAACGACGCCGAACATGGCGAGACCGCCTGCAGTGACTGTGGTCTCGTTGTCGACAAGGATGAAATCGATCACGGCCCTGAGTGGCGTGCATTCAGTAGTCAGGAGCGAGATCGGAAAAAGCGCACTGGCGCACCTACCACGAAGCTGATGCACGACAAAGGCCTGTCGAGCCAGATCGGCTGGCAGAACAAGGACGCCTACGGCAATGCGTTGTCCTCACGTAAGCGTCGGCAGATGCAGCGTCTGCGTACGTGGGATGAACGCTTCCGTACCCGCAACTCCAAGGAGCGTAACCTCAAGCAAGCAATCGCCGAAATGGAGCGCATGGGTAGCGCGCTTGGCGTCCCGAAAGACGTTCGCGAGACTGCGAGCGTGATCTACCGTCGTGCGCTCGCCGAAGACCTGCTTCCCGGGCGCTCCATTGAGGGTGTCTCGACGGCTGCACTCTACGCGGCGATCCGTCAGATGGGGCTCCCGAAGAGCGTCAAGGAAGTGGGTACAGTCTCGCGCGTCGACGAAGCGGAGTTCAAGCGTGCCTACCGCTACATCAACCAGGAGCTGGGTCTCGAAGTCGGACCACCCGATCCCCGGCAGTACGTCTCACGGTTTGCGTCCGATCTCGATGTCTCGGAGGAGACCGAACGACGCGCTCGCGAACTCCTCGAAACGGCCCAAGAGCAGGCCGCTCACAGTGGGAAGAGTCCCGTGGGGCTTGCCGGCGCAGCACTTTACGCTGCCGGAGTCCTCACTAACCGCAAACTCACTCAGGACGAAGTGAGCGAGGTTGCAGGGGTAAGCACCGTGACTATCCGGAATCGGTATCAGGAACTCCTCGAAATTGAAGGCAATACTGATACCGCGACTCCGTCAGCGGCTGCCGCTTAA
PROTEIN sequence
Length: 360
LKCSVSQYSHRNHPEHPLTVVILEGNTTRIQTHESSERTNEQSQERTTDAEESERVCPECGGRLVNDAEHGETACSDCGLVVDKDEIDHGPEWRAFSSQERDRKKRTGAPTTKLMHDKGLSSQIGWQNKDAYGNALSSRKRRQMQRLRTWDERFRTRNSKERNLKQAIAEMERMGSALGVPKDVRETASVIYRRALAEDLLPGRSIEGVSTAALYAAIRQMGLPKSVKEVGTVSRVDEAEFKRAYRYINQELGLEVGPPDPRQYVSRFASDLDVSEETERRARELLETAQEQAAHSGKSPVGLAGAALYAAGVLTNRKLTQDEVSEVAGVSTVTIRNRYQELLEIEGNTDTATPSAAAA*