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sw_4_scaffold_9059_1

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(3..1721)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01323}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01323};; PEP {ECO:0000255|HAMAP-Rule:MF_01323}; Plastid-encoded RNA polymerase subuni similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 534.0
  • Bit_score: 353
  • Evalue 6.20e-94
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gracilaria tenuistipitata var. liui RepID=RPOC1_GRATL similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 534.0
  • Bit_score: 353
  • Evalue 4.40e-94
DNA-directed RNA polymerase subunit gamma similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 388.0
  • Bit_score: 349
  • Evalue 1.80e-93

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Taxonomy

Gracilaria tenuistipitata → Gracilaria → Gracilariales → Florideophyceae → Eukaryota

Sequences

DNA sequence
Length: 1719
GTGTTAGATGCAAAATCTTTATGTATAGCTTCTCCCGAATGGGTTACTTGTTGTACTCCTTCAATGTCAATATTTGATTTTCACATTTGGCAAAACGAAGTATACCCATTTATTAAAGGTGAAAAAGGTAGTTTTGATGTGGATGTACCATGGAATACCTTTTATTCATTACCCGAAAACCTTAATGCGTGTGCTTCGGGGCGGGCTTGGGTAGCACATGGATTTTCGTACTTCAAAGATACATCTACCTTTGCTTTTTCACAGCTTTTTACAAGGTTATCGTATAAAGAAGGCTTGCTTTATATACAATATAAATTGTCTTTGCTGCATTCGTTAGGATATTCACATAGAAGTTTATTGCACAAACAAATGTTTTCATACCTATGTAATTACCATAGCAATCGCGAGGCAAGTAGTGCGCGTAAAGCCATGCATACCCCTTTGCAAATACTACAGAAGAAAAAACATCTGCTGCATTCGTATACCCTTTTTAAACGTACATTAGGTAAGTCACACGCGTCGCATTCAGCAATATCAACTGAACGATGGCATATAGCAACACACCTTAATTCACTTTTTTTAAAATATATTCCAGTATTACCCCCGGATTTAAGACCTATAATACAGGTTGAAAGTGGAAAGTTTGCCACCTCTGATGTAAATGATCTATATCGATTTGTTATTTTTAGAAATAATAGGTTAAAGCGTTTTTTACAACAAAATGTTCCAGAGGCAATCTTTTATCAAGAATTAAGGTTAGTTCAACATTCGGTTGATGCACTATTTGATAATGGCAAACTTAAACAACCGATTTCGCGTTCTTCAATGTATGAAGACTTCGAACCATTAAAATCACTTTCAGATCGTTTAGTAGGAAAAAGGGGTCGATTCCGTTTAAACCTTCTTGGAAAACGTGTTGACTATTCTGGAAGATCTGTGATTGTGGTTGGTCCAAAATTACGGCTGTTCCAATGTGGTCTTCCGATTAAAATGGCATTTGAGCTTTTCTTTCCATTTTTAATACAATATGTATTAAAAAAAGCATTAGCAAAAACAACAAAAAGCGCAAAGGTATTTTTACGTGAACATCCTAAAGTTGTAAAATCTGCTTTAGGTGAAATTGTGCATTCACATCCTGTAATTCTAAATCGTGCGCCTACACTTCATAGAATGGGAGTACAATCATTTTTCCCAGTTTTAGTTGAGGGTAAAGCTATACAATTACATCCGTTAATGTGTCCATCGTTTAATGCTGATTTTGATGGAGATCAAATGGCAGTTCATATTCCTCTTCGATTGCAATCACACATTGAGTGTCGTTTTTTAATGCTATCTGCACATAATTGGCTTTCACCAGCAAACGGTGAAAGTATTATTAATTTAAGCCAAGATATGGTTCTTGGGTTTTATTATCTTACTTTCGCTTCAGCATACAATGAAGTTTACCACCATAGTAAAGATACAAAAGCCATTGTAAATAAAGGATGTAAATTACATGATATGTTTTGGATAAACTTTAATGAGTATGCATCGTCATTTATTAATGAAGGCGCATCACATTCATATATGATTACTCGCAGTACACTGAATGAAAGTATAACCACTTGTGTTGTTTCTCGTACCGGTTGGCTTTATAAAATGTATGCAACAAGAGTGAAGCTTGAAGATAGCTTTGCAAAATACCGTTTATTATACGTGCTTACAAGTGTAGGTAGGATG
PROTEIN sequence
Length: 573
VLDAKSLCIASPEWVTCCTPSMSIFDFHIWQNEVYPFIKGEKGSFDVDVPWNTFYSLPENLNACASGRAWVAHGFSYFKDTSTFAFSQLFTRLSYKEGLLYIQYKLSLLHSLGYSHRSLLHKQMFSYLCNYHSNREASSARKAMHTPLQILQKKKHLLHSYTLFKRTLGKSHASHSAISTERWHIATHLNSLFLKYIPVLPPDLRPIIQVESGKFATSDVNDLYRFVIFRNNRLKRFLQQNVPEAIFYQELRLVQHSVDALFDNGKLKQPISRSSMYEDFEPLKSLSDRLVGKRGRFRLNLLGKRVDYSGRSVIVVGPKLRLFQCGLPIKMAFELFFPFLIQYVLKKALAKTTKSAKVFLREHPKVVKSALGEIVHSHPVILNRAPTLHRMGVQSFFPVLVEGKAIQLHPLMCPSFNADFDGDQMAVHIPLRLQSHIECRFLMLSAHNWLSPANGESIINLSQDMVLGFYYLTFASAYNEVYHHSKDTKAIVNKGCKLHDMFWINFNEYASSFINEGASHSYMITRSTLNESITTCVVSRTGWLYKMYATRVKLEDSFAKYRLLYVLTSVGRM