ggKbase home page

sw_4_scaffold_94_11

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(12650..14287)

Top 3 Functional Annotations

Value Algorithm Source
Choline/carnitine/betaine transport n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GU87_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 474.0
  • Bit_score: 594
  • Evalue 8.30e-167
High-affinity choline uptake protein BetT {ECO:0000313|EMBL:KGE05173.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rub similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 513.0
  • Bit_score: 608
  • Evalue 7.80e-171
choline/carnitine/betaine transport similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 474.0
  • Bit_score: 594
  • Evalue 2.30e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudohaliea rubra → Pseudohaliea → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1638
TTGCGCCTCGCATTCCCAAACCGCTCAGAAAGCAGCATTTCTAAAAAGTATCCTATGGCTCGTCGATCCCCACTTCTATCCCGCTTCCTTAACGCTATGGAGCCGTGGGTTTTTCTGCCCGCAGCGGCATTGGTCATCGGCTTCGTTGTTTGTGGTGCCCTGTATAGCGAGACCACGCGCCGTAGCTTTGAAACCCTACAGTCGGGAATTGTAAAGAATTTTGGTTGGTTCTACATCCTGACTGCCAGCGTCCTGTTGGGCTTTATCGTCTGGTTATTCTTCTCGCGCTTTGGTCGCATCCGCCTAGGGAAACCTGGCACCCAACCCGAGTTCGGTTACCTGAGCTGGTTCAGTATGCTGGTGAGCGCCGGCATGGGCATTGGCATCGTGTTTTTCGGAGTCGCCGAGCCCGTACAGCACTTCGTCAACCCGCCCATTGGCGAAGGAAGAACCCCCGAAGCCATCCTAGAGGCGATGCGCTTCACCTTCTACCACTGGGGTCTGCATCCCTGGGCGATCTATTCTGCCATTGCCCTTCCGCTGGCTTACTTTCACTTCCGCCATGGTCTTCCCTTGGCACCGCGATCGCTGCTTTATCCACTCCTGGGTAAGGGTATCTACGGCGCTGCTGGTCACGCGGTGGACGTACTCTGCACTGTGGGGACGCTATTTGGCGTGGCGACTTCGCTGGGACTGGGAGCAGCTCAGGTTAATGCGGGCTTCGGGCGTTTGTTTGGCATGTCTCAAGGAACTGGATCCCAGCTACTGCTCATCGCTATCATTACTGCCGTAGCAACAATTTCGGTTGTCTCTGGTCTGAGTTACGGCATCCGCTTTCTCAGCCAGTTCAATATCAGCCTCACGGTGCTTATCTTCGCTTTTGTTTTACTGGCTGGACCGACAGTTTTTCTACTGGAGACATTTGTAAACAGCCTAGGATACTACTTGCAGAAGTTTCCCTTCACTAGCCTCCATATCAATCCGGGGACTCAGGGGGGATGGCAGGCTCAGTGGACCCTGTTTTACTGGAGTTGGTGGATTTCCTGGTCGCCCTTTGTGGGCGTATTTGTGGCGCGGCTTTCTAAGGGGCGTACCATCCGGGAGTTCATTGCCACTGCCTTACTCGTTCCCACTTTGGGAGGCTTCCTGTGGTTTTCAGCACTGGGCGGGACGGCGCTTTACATCGAGATGTTCGGTTCGGGAGGAATAGCAGAACAGGTTCAGCAAAACCAGGCACTAGCCCTGTTCGCGGTACTCGGACAAATCCCCTTGCAAACCGTAACCTGGGTTCTAGCCACGTTGCTGGTAATCATTTTTTTTGTGACTTCCTCCGACTCCGGCTCCCTAGTGGACGACATGGTGACTTCAGGAGGGCACCCCAATCCTCCCAAAACACAGCGCCTATTCTGGGCTTTGGCAGAGGGCACGGTGGCGGGCACCCTACTGTATTTTGGGGGTCTAAATGCCCTGAGTACCGCTTCCCTCACTACAGGACTGCCCATGGCTATTTTCCTGTTAATCGCTGCCTATGGCTTGGTTCGGGCGCTACGAGTCGATCATGCTACCCAGGGAGTGCCCTCGACGGAGAAGCTCCAGGAGAATGATCCCCATCACCAGACAAAGAGGAGTGAGGAGTGA
PROTEIN sequence
Length: 546
LRLAFPNRSESSISKKYPMARRSPLLSRFLNAMEPWVFLPAAALVIGFVVCGALYSETTRRSFETLQSGIVKNFGWFYILTASVLLGFIVWLFFSRFGRIRLGKPGTQPEFGYLSWFSMLVSAGMGIGIVFFGVAEPVQHFVNPPIGEGRTPEAILEAMRFTFYHWGLHPWAIYSAIALPLAYFHFRHGLPLAPRSLLYPLLGKGIYGAAGHAVDVLCTVGTLFGVATSLGLGAAQVNAGFGRLFGMSQGTGSQLLLIAIITAVATISVVSGLSYGIRFLSQFNISLTVLIFAFVLLAGPTVFLLETFVNSLGYYLQKFPFTSLHINPGTQGGWQAQWTLFYWSWWISWSPFVGVFVARLSKGRTIREFIATALLVPTLGGFLWFSALGGTALYIEMFGSGGIAEQVQQNQALALFAVLGQIPLQTVTWVLATLLVIIFFVTSSDSGSLVDDMVTSGGHPNPPKTQRLFWALAEGTVAGTLLYFGGLNALSTASLTTGLPMAIFLLIAAYGLVRALRVDHATQGVPSTEKLQENDPHHQTKRSEE*