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sw_4_scaffold_944_4

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(2658..3317)

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 219.0
  • Bit_score: 384
  • Evalue 2.50e-104
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658709 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 219.0
  • Bit_score: 384
  • Evalue 9.00e-104
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25894.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 219.0
  • Bit_score: 384
  • Evalue 1.30e-103

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 660
ATGGCTGACAACCAGCGAGAAACCGTCACCCGCACCCGCAGCCGGAAGGCTTCCAACCAGTACGAAGCCCTCCAGCAGATGAGCGACGAGGACCTCATGTCCCAGTTTCAGGCCGGGACCGTCGAGGCGTTCAACATTCTCGTCGACCGGTACTCCGACCGGCTCATGCAGTACCTTTACCGCTTCCTCGGAGACATGAAGCGGTGCGAGGATCTGCTTCAGGAGACGTTTCTGCGCGTGCACCGCAACCGCCACAGCTACCGGCGCATCGCCAAGTTTTCGACCTGGCTCTACACCATCGCCGGCAACCTGGCGCGCTCGGAGTACCGCAAGCGCAAGCGCCGCCGGATGCAGTCGATCCAGTCGGTCAACCGCGACAACGAGGAGTACGAAATGGAGATCCCCGACGAGAGCTTTTCGCCGGATCGCCACGCGGAGTCGACCATTCAGGACCGCTACGTCCAGGACGCGCTTGAAGAGATCCCGCCGGCCTTCCGCGAGGTCGTGGTGCTGCGCGACATTCAGCAGCTGGCCTACGACGAGATCGCCGAGATCACGGGCCTGCCGATGGGCACGGTCAAGAGCCGCATCAATCGCGGGCGCACGAAGCTGCAAAACCTCCTTCAGGAAGTCTACCCCTTCGAGGAAGGCAGCGAGTAG
PROTEIN sequence
Length: 220
MADNQRETVTRTRSRKASNQYEALQQMSDEDLMSQFQAGTVEAFNILVDRYSDRLMQYLYRFLGDMKRCEDLLQETFLRVHRNRHSYRRIAKFSTWLYTIAGNLARSEYRKRKRRRMQSIQSVNRDNEEYEMEIPDESFSPDRHAESTIQDRYVQDALEEIPPAFREVVVLRDIQQLAYDEIAEITGLPMGTVKSRINRGRTKLQNLLQEVYPFEEGSE*