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sw_4_scaffold_9968_1

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(1..396)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1033806 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 106.0
  • Bit_score: 143
  • Evalue 1.70e-31
2'-5' RNA ligase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ40_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 106.0
  • Bit_score: 143
  • Evalue 1.20e-31
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 106.0
  • Bit_score: 143
  • Evalue 3.50e-32

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Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 396
ATGCGACTGTTCGTCAGTGTCGACCTCGACGGACTCGCGGCGGAGGTCACACGAGTCCAGGACCTGCTCTCGGACGCGAGCGGCCTCAGGATGACCGACCCCGAACAGGCACACCTCACGTTAAAGTTCCTCGGCGACACCGACCCAGATCGGCTGCCGGCACTCACGTCGGAGCTCGACCGGGCGGTAGAGGAAAACGGGGTCGAGCCGTTCCGGGCCGAGTTCGGCGGCCTGGGCGTGTTCCCGAGCCACGAGTATATCAGTGTCGTCTGGCTCGGGGTCCGCGAGTGGAGTCTGTACCTCGGGGGCGGGATCGTCGTCCCTCCCGACGTCCGCGTCCCCCTGTGGACGCTCTCCGGGCTCGCCTTACTCGTGGGCGTCGGGATCGTCGCGCTC
PROTEIN sequence
Length: 132
MRLFVSVDLDGLAAEVTRVQDLLSDASGLRMTDPEQAHLTLKFLGDTDPDRLPALTSELDRAVEENGVEPFRAEFGGLGVFPSHEYISVVWLGVREWSLYLGGGIVVPPDVRVPLWTLSGLALLVGVGIVAL