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sw_4_scaffold_110_2

Organism: SW_4_Oscillatoriophycideae_48_29

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38
Location: comp(93..317)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 68.0
  • Bit_score: 108
  • Evalue 3.40e-21
tRNA-splicing ligase RtcB n=1 Tax=Chlorogloeopsis RepID=UPI0002DC627D similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 70.0
  • Bit_score: 110
  • Evalue 6.50e-22
protein of unknown function UPF0027 similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 64.0
  • Bit_score: 106
  • Evalue 3.40e-21

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Taxonomy

Fischerella sp. JSC-11 → Fischerella → Stigonematales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGAATTCATGGATATTTTGGAACGAATTTCGGACACCATTTGGGAGATTCCCGTTTCTTACCAAGAAAGGATGCGCGTTCCTGCCCGGATTTATGGGACAGAAAAGTTAATCCAGCAGATGGACAACGCGGTTTACGAGCAACTAAACAATGTTGCCACACTTCCTGGAATTACTGACTATGCCTTTTGCATACCACCAGGGCTATTTCATTCTAAGTGGTAG
PROTEIN sequence
Length: 75
MEFMDILERISDTIWEIPVSYQERMRVPARIYGTEKLIQQMDNAVYEQLNNVATLPGITDYAFCIPPGLFHSKW*