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sw_4_scaffold_24_1

Organism: SW_4_Oscillatoriophycideae_48_29

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38
Location: 271..1140

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 287.0
  • Bit_score: 413
  • Evalue 5.10e-113
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 287.0
  • Bit_score: 413
  • Evalue 2.60e-112
Shikimate dehydrogenase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNS6_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 287.0
  • Bit_score: 413
  • Evalue 1.80e-112

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Taxonomy

Microcoleus sp. PCC 7113 → Microcoleus → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCAACTCATCACAGGTAAAACCAAACTTCTCGGCGTTATTGGTCATCCCGTTGAGCATTCCCTCTCGCCAGTAATGCACAACGCTGCATTAGCCTCCCTCTCTCTCGATTATGTTTATATCCCCTTACCCGTCAAATCCGAAGATTTAGCAAACGCGATCGCCGGTTTGGATGCAATCCATCTCGTCGGCTTCAACGTAACCATTCCTCACAAACAGACAATCCTGCCGATGCTATCGGAAGTGTCGCCTGTGGCGCAAATGGTGGGGGCAGCAAACACAATTTATCGCACTGAAGCAGGTTGGGGCGGCACAAACACGGATGTCGATGGATTTATCGCTCCTCTGAAAGCCTTACAGCGAAATTGGCAGCAAGTTTCCCCAGTGATTATCGGCAATGGCGGTGCGGCGCGAGGAGTAGTAGCGGGATGTGCCGAATTAGGCTGTCGTGAAATTCACATTATAGGTCGCAACCGAGAGAAACTAGCACAATTTCAACAAAGTTGGCAGAATACGCCTCTCCAAGCGACGCTAAATACGCACCAGTGGGAAGAATTACCTGCGCTGATGCCCTCTACCCAGCTATTGGTTAATACCACCCCCATCGGGATGTCTCCGAATGTGGAAAAATCTCCTGTTGATCCAGCCGCAATGGAGAAATTACAACCAGGAGCGATCGCGTATGACCTCATTTACAGGCCCAGTCCCACTCAGTTTCTAGAGCAGGCAAAAAGCCAAGGCGCGATCGCGCTCGATGGACTAGAGATGCTGATTCAACAGGGAGCTGCCGCTTTAGAGATGTGGCTACAGCAGCAAGTTCCAGTTGATGTTATGCGCCAATCTTTGCTAGAGCAGTTGGGAAGGGATTAG
PROTEIN sequence
Length: 290
MQLITGKTKLLGVIGHPVEHSLSPVMHNAALASLSLDYVYIPLPVKSEDLANAIAGLDAIHLVGFNVTIPHKQTILPMLSEVSPVAQMVGAANTIYRTEAGWGGTNTDVDGFIAPLKALQRNWQQVSPVIIGNGGAARGVVAGCAELGCREIHIIGRNREKLAQFQQSWQNTPLQATLNTHQWEELPALMPSTQLLVNTTPIGMSPNVEKSPVDPAAMEKLQPGAIAYDLIYRPSPTQFLEQAKSQGAIALDGLEMLIQQGAAALEMWLQQQVPVDVMRQSLLEQLGRD*