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sw_4_scaffold_202_12

Organism: SW_4_Oscillatoriophycideae_48_29

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38
Location: 8840..9796

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, cyanobacterial RpoD-like family n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DN02_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 319.0
  • Bit_score: 510
  • Evalue 1.20e-141
RNA polymerase sigma factor, cyanobacterial RpoD-like family {ECO:0000313|EMBL:ERN41994.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 319.0
  • Bit_score: 510
  • Evalue 1.70e-141
sigD; RNA polymerase sigma factor SigD similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 318.0
  • Bit_score: 503
  • Evalue 4.20e-140

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Taxonomy

Rubidibacter lacunae → Rubidibacter → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGACAACTGCTCAAAATTCTACTGACTTGGTTCGGACCTACCTGCGAGAAATTGGTCGAGTTCCCCTATTAACGCACGAAGAGGAAATTTATTATGCTAAACAAGTGCAGCAGTTAGTCGCCTTTGAGAAAGTCAGAGATTCTCTAGAAGAAGAGTTGGGGAGTCAACCAACCCACAAGCAGTGGGCGCAGGCTGCTGAAATTACCGAGGAAGAATTAAGCTCTGTAATTGCAGCGGGTGAAGCTGCCAAGCGCAAGATGATCGAGGCAAATCTGCGACTGGTGGTATCGGTTGCCAAGAAATACATTAAGCGCAATCTGGACTTGCTGGATTTGATTCAGGAAGGCACTATCGGCATGCAGCGAGGGGTAGAAAAATTTGATCCCACCAAAGGCTATCGGTTTTCGACTTATGCTTATTGGTGGATTCGCCAAGCGATTACTCGCGCGATCGCAGAAAAAAGCCGCACCATTCGCCTCCCTATTCACATTACCGAAAAGCTCAATAAAATCAAGCGAACCCAGCGGCAGTTGGCGCAAGATTTAGGACGAACGGCGACAGTTTCGGAATTGGCAGAAGAGTTGGATCTCTCTCCCAAGCAGGTGCGGGAGTATCTCGAAAGAGGACGTCAGCCCCTATCCCTAGATTTACGAGTAGGAGATAATCAGGATACGGAACTGGGAGAACTCCTAGAAGATGATGGCGCTTCACCAGAAGATTACGTCACCGAGTCCTCGCTTCAGGTAGAAATGGAAAAACTGATGGCGGATTTAACGCCTCAGCAACGAGAAGTCGTAGCACTGCGATACGGACTCGCAGATGGGCAATCCTTAACGCTGGCTAACATCAGCACTCGCCTGAATATCAGCCGGGAACGAGTGCGGCAAATTGAGCGAGAGGCACTCTCGAAGCTACGCAAGCGCAAGGCGGAGATGCGCGAGTATCTCGCTAGTTAA
PROTEIN sequence
Length: 319
MTTAQNSTDLVRTYLREIGRVPLLTHEEEIYYAKQVQQLVAFEKVRDSLEEELGSQPTHKQWAQAAEITEEELSSVIAAGEAAKRKMIEANLRLVVSVAKKYIKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKRTQRQLAQDLGRTATVSELAEELDLSPKQVREYLERGRQPLSLDLRVGDNQDTELGELLEDDGASPEDYVTESSLQVEMEKLMADLTPQQREVVALRYGLADGQSLTLANISTRLNISRERVRQIEREALSKLRKRKAEMREYLAS*