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sw_4_scaffold_2187_3

Organism: SW_4_Bacteria_49_11

near complete RP 42 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 7 / 38
Location: 2104..3069

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 311.0
  • Bit_score: 191
  • Evalue 1.30e-45
pseudouridine synthase, RluA family (EC:3.2.1.17); K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] id=137317 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 315.0
  • Bit_score: 189
  • Evalue 4.70e-45
putative pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 326.0
  • Bit_score: 185
  • Evalue 2.50e-44

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Taxonomy

R_Gammaproteobacteria_37_14 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGCGTACCCGTCTTGAACATCACGGAGAGTCCCGACGTCTGGACGCTATGTTGGCAGAACACATGGCGGAGTTTTCGCGTGAAGAATTAAAGGAGGCGATTCGCGAGGGATATGTTCGCGTGGAGGGGCGCACGGTTTACAAACCGCGGTTTGCCCTGGAATCGGGAGATTGTGTGGATATAGACATTGCGCGCTTTAAAAAGAGTTTTTTCCAGACCCCCACCCCACGGGGGGACGCGTTGCGAGACAAGGTGGAAGTGCTCTCGTGCTATCCTGACTTTCTCGTGGTGAACAAACCGGCAGGGCTGTTAGTGCATCGTACCCATAATCCTCACGAAGTTTCGTTAGTGGAGATATTGACCGAGTGGTATCCGGAGATACAGGGAGTGGGAGAATCGGAAGGCATTCAGGACCGGAGCAGTATTGTACATCGTCTTGATAAAGATACGAGCGGCATTTTGGTTGTGGCTCGAACGACGCGTGGATATCGTCAATTGAAACACAAATTTCAAAACCGAACAGTGGATAAAACCTATATTGCTATTGTGCGCGGAACCATGAACGAAGAACGCGGGGTCATATCAGCTCGGGTAGCGCGGTCGAAAACCGATCATACCCGCCGGGTAATCGTGACGGACCAAACTTCGAAGCGGCATTACTCGGGCGTCCCGCGGGAAGCACATACCGAATACGAAGTTCTCCAATATGGAACTGTCCGAGATACTGAGGTAACGAAAATCAGAGTGTGGCTGTATACCGGCCGTACGCATCAGATTAGACTGCATTGTAAACACCTCGGACATCCGCTCCTCGGAGATAAAATGTATGGGGGCAAGTGGGAAAAGCACCATTCTTCGGAAACGCGGCACCTATTACATGCGGAGAGTCTGTCCTTTGAATACCAAGGAGAACGTTACGATTTCTCCAGCGAACCGCCCGCAGAAATGGAGTTAGATCACCTCTAA
PROTEIN sequence
Length: 322
MRTRLEHHGESRRLDAMLAEHMAEFSREELKEAIREGYVRVEGRTVYKPRFALESGDCVDIDIARFKKSFFQTPTPRGDALRDKVEVLSCYPDFLVVNKPAGLLVHRTHNPHEVSLVEILTEWYPEIQGVGESEGIQDRSSIVHRLDKDTSGILVVARTTRGYRQLKHKFQNRTVDKTYIAIVRGTMNEERGVISARVARSKTDHTRRVIVTDQTSKRHYSGVPREAHTEYEVLQYGTVRDTEVTKIRVWLYTGRTHQIRLHCKHLGHPLLGDKMYGGKWEKHHSSETRHLLHAESLSFEYQGERYDFSSEPPAEMELDHL*